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H1-18-all-fractions_k255_5594954_1

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 3..773

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 254.0
  • Bit_score: 328
  • Evalue 5.60e-87
ligA; DNA ligase (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 253.0
  • Bit_score: 327
  • Evalue 3.30e-87
NAD-dependent DNA ligase LigA n=1 Tax=Herbaspirillum lusitanum RepID=UPI000375C8FD similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 265.0
  • Bit_score: 333
  • Evalue 1.20e-88

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
CGCTGTTCGGGCGGCTGGACCCACTGCGGCGCCCAGAAGAAGGGCGGCTTGATGCATTTCGTCTCGCGCCGGGCGATCGACGTCGAGGGTCTGGGCGACCAGTTGATCGAACAACTGGTCGACAAGGGCGTGATCGACACGGCCGCCGACCTGTACGCGCTCGACCAGGAAAAACTCTGCGGCCTGGAACGCATGGCCGCCAAGTCCGCCCAGAACGTGCTCGACGCGCTGGAAAAGTCGCGCGACACGACGCTCGCGCGCTTCATCTACGCGCTCGGCATCCGCAACGTCGGCGAATCGACCGCCAAGGCGCTGGCCCAGCATTTCGGCAATCTCGACGCGTTGCTGCATGCGGCCGCCTTCGAAGGCGGCCTGCAGTTGCTGGAAGTGGCGGACGTGGGGCCGGTGGTGGCGCGCTCGATTGCCGACTTCCTCAGCGACCCCGTCAACCTGGACCTGGTGGCGCGTTTGCGTCGCCAGTTGCGCTGGAAAGAGGGCGAGCACGTCATGACGCGCCCGGCCGGTGCGCTGGCCGGCAAGACCTTTGTGCTGACCGGCACCCTGCCTGGCCTTTCGCGCGATGAAGCGGGCGCCATGATCGAAGCGGCCGGCGGCAAGGTGTCCGGCTCCGTATCGAAGAAAACCGCCTACGTCGTTGCCGGGGCTGAAGCGGGCAGCAAGCTGACCAAGGCCGAGGAGCTCGGTCTTGCCATCCTCGATGAAGCAGGGCTGCTGGCGCTGCTCAATTTACCAGAACCAACTCCAGAATAA
PROTEIN sequence
Length: 257
RCSGGWTHCGAQKKGGLMHFVSRRAIDVEGLGDQLIEQLVDKGVIDTAADLYALDQEKLCGLERMAAKSAQNVLDALEKSRDTTLARFIYALGIRNVGESTAKALAQHFGNLDALLHAAAFEGGLQLLEVADVGPVVARSIADFLSDPVNLDLVARLRRQLRWKEGEHVMTRPAGALAGKTFVLTGTLPGLSRDEAGAMIEAAGGKVSGSVSKKTAYVVAGAEAGSKLTKAEELGLAILDEAGLLALLNLPEPTPE*