ggKbase home page

H1-18-all-fractions_k255_5892363_3

Organism: H1-18-all-fractions_conc_55

near complete RP 45 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 2381..4096

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2U5Q0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 571.0
  • Bit_score: 501
  • Evalue 7.70e-139
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL86477.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 571.0
  • Bit_score: 501
  • Evalue 1.10e-138
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 571.0
  • Bit_score: 474
  • Evalue 3.70e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
ATGAAGCGCTTCGCCGACTACCTTTCCCTGCAACTGCTGCGTCAGATCGGTATCCGGCGCCGCCTGCTGCTGGCCTTCTTGCTGCTGGCGCTGCTGCCGCTGCTGGTGTCGGGCACCATCTGGTACCAGGATTCGACGGCGGCGATCGCGGAACGCACCCGGGTGCTCTCGACCGAGGTGGTCAAGCAGGTGGCCAAGAACGTGGGCGTGGAGATGGCCAGGCTGGAATCGGACAGCGAGGCGCTGGTGCTGTCGAGCCCCATCCAGGAAGGCCTGTCCGCCTACCAGGGCGGCGATGAGACGGCCATGACGCAGGCCCGCCGGGACCTGATGCGCGTGTTGCTGGACCGCTATGGCTCGTTCGGCTTCGTCAGCCAGAAATATCTGCTCGATCGCGACAACCGCATCATCGACACCCAGGTCTTCACCAGCCTCGGACGAGGCGTGGTGCAGTTCGTCGAGCGCGCGCCCAAGCTGCTGGGACGGCCCTGGTGGTCGACCCTCACCAACAGCAGCGGCCAGACCAGCATGGTGCTGCTGCGCGCCATTCACAGCAAGTCGAACAATCGCCTGATCGGCCACCTGTTCCTGGGCCTGCGCCCGGCCCACTTCGCGGCCATTTTCGAAGACGTCGACCTGGGCCAGCACACCGAGGTGGCGGTGGTCGATGCCGACAGCGGCAAGGTGCTGGTCAACAGCGTGGAAAAAATCGGCGGCGAGCCGACCCCGGCGCCGCCGCGCGCCCTCACCGAGGAACTGCGGCGCAGTATCGCCAGCAACCAGCGCAGCGGCTTTTTCGGCCACGACGCCCAGCTGACGGCCTACGCCCGCATTGCCGACACCAGCTGGTTCGTGGTCGGCTCGATTGCCCAGAGCCGGCTGACCACGGAGGCGCGCGTCATGCTCGAGACGAGCGTGCTGATTGGCCTGGCCGGCCTGTTCGGCTGCGTGCTGCTGGCGATGCTGCTGGCGCGCAGCATTGCCAAGCCGCTCGACGACCTGGTCGACAGCATGCGCGCCAGTGCGCAGGGGGCGCATGTGCGCCCGGTCGAGCCGCAGGGCAGCGACGAACTGACCACGCTGGCCCAGCATTTCAACACCATGGCCGGCACCCTCATGCGCAACCAGGAGCAGCTCGAAGAGCGGGTCGATGAACGCACCCGCGACCTGGCCGCGGCCAACGAACAACTGGCGGCACTGTCGATGACGGATGCGATGACGGGCATCGCCAACCGGCGCCGCTTCGATGAAGCACTCGAGCGCGAACTGCAGCGCGCCAGCCGCGCCGGTACCCCGCTGGCTTTGCTGATGATCGACGTCGACTTTTTCAAGAAGTACAACGACCATTATGGACACCAGCAGGGCGACGCCTGCCTGCGCAGTGTGGCGATGCTGCTGCAATCGCACGCCCGCCGCGCCGGCGACCTGGCGGCCCGTTACGGCGGCGAGGAATTTACCCTGATCGCCGCCGATACCGACCCAGCCGCCGCCAACGCACTGGCCGAGACCATCCGCGCCGGCGTCGAAGCGCTGCGCCTGCCCCACGTCGATTCGCCGATGGGCGTGCTGACGGCCAGTGTCGGCGTGGTGGCGCTGGTGCCGACATCGACCACCAGTGCAGCCCAGATCCTGGGCCTGGCCGACCAGGCGATGTACCGCGCCAAGGACCAGGGCCGCAACCAGGCCGTGATGTCGCAGTTGCGGCTGCGCGCCTGA
PROTEIN sequence
Length: 572
MKRFADYLSLQLLRQIGIRRRLLLAFLLLALLPLLVSGTIWYQDSTAAIAERTRVLSTEVVKQVAKNVGVEMARLESDSEALVLSSPIQEGLSAYQGGDETAMTQARRDLMRVLLDRYGSFGFVSQKYLLDRDNRIIDTQVFTSLGRGVVQFVERAPKLLGRPWWSTLTNSSGQTSMVLLRAIHSKSNNRLIGHLFLGLRPAHFAAIFEDVDLGQHTEVAVVDADSGKVLVNSVEKIGGEPTPAPPRALTEELRRSIASNQRSGFFGHDAQLTAYARIADTSWFVVGSIAQSRLTTEARVMLETSVLIGLAGLFGCVLLAMLLARSIAKPLDDLVDSMRASAQGAHVRPVEPQGSDELTTLAQHFNTMAGTLMRNQEQLEERVDERTRDLAAANEQLAALSMTDAMTGIANRRRFDEALERELQRASRAGTPLALLMIDVDFFKKYNDHYGHQQGDACLRSVAMLLQSHARRAGDLAARYGGEEFTLIAADTDPAAANALAETIRAGVEALRLPHVDSPMGVLTASVGVVALVPTSTTSAAQILGLADQAMYRAKDQGRNQAVMSQLRLRA*