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H1-18-all-fractions_k255_1348341_10

Organism: H1-18-all-fractions_metab_conc_61

partial RP 32 / 55 MC: 7 BSCG 36 / 51 MC: 6 ASCG 11 / 38 MC: 3
Location: comp(9937..11583)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E7P8_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 307.0
  • Bit_score: 113
  • Evalue 4.30e-22
Transcriptional regulator {ECO:0000313|EMBL:KIF64749.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 316.0
  • Bit_score: 114
  • Evalue 4.60e-22
alginate regulatory protein AlgP similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 284.0
  • Bit_score: 107
  • Evalue 6.70e-21

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1647
GTGGGCGGCGTCCGTGTTCTCGGGGGGGCCCGCGTTTCCGTGTTCGATAGGTTCACGCTCGACGAAGTGAGCGCCAAGATCTGGTGGCCGCTCGCGATGGTTGCCCTTGTCGCCCTCGTCCTGACGGTTCCTGCCGCGAACCACGCCGCAGACCGGGCACGCCGCGAGAGCGCCGCACGTGCGATCGTGATCAGCGCCCAGCAGATCGAGCCGCTCACCGCCACCGGCGCCTCTGTTGCGGATCTCAACTCGGCGCTCGCCGACATCCAGCGGGCCAACCCGACGTACGACGCGGTCCGCGTGTGGACCCCGGGCAAGCTTCTCGTCGCCTCGTCGGTGCCGAAGGATCCGTTGTTCGGCGGCACCGCCGGGGTCAGCGACAGCGACATCGACGGCGCCCTGTCGACCGGCTCGCGCCTCGAGGTGACCAACCGAGAGCCCACCGGCGACGTCGGACCGACGACCGTCCATACCTACACGAAGATCGACGGTCCCACCGCTGCTGAGGTGACCGAGTTCGAGGCAAGCGACGCAGCACTTCTGGCCCAGGTCCACCACGATTGGAACGGCTATCGGATCGTCGCGGCCGCGGCGTTCCTGTTCTTGCTGGCGCTCGCGCTCCTGTCGATGCGCGAGCCGGTCGCCGACATCGGGGTAGGCGTGCCGTTCTATCCCGCGTCGCTGCCGCCGAACCTCGCGATCGTCGACGCCGAGCGGGCCGTCGTGATCGAGCACGAAGACGATCACGTGCGGCAGCGGGTCGCGAGCCTGCAACAACGCCTCGATGAGAGCGAGCGGCAGCGGTTGAAGGCCGAGGCACGACTGCAACAGGCGCTCACGACGTTGGGCACCGGCGGACGCAACGTTCCGGGCCTGCCGCCGGAACCGCCGACGCCGACGCTGCCACCGTCCCGGACGGCGGGCCGGCGCCCCACACCGGTGGATACAACCGCGGCGCCGGCGGCCGTGGCGCCCGTGGTTCCCACGACATCTCCCGTCGTCGAACCGGCGGCCACAGCCGCCGCGTCGAGCCCGAAGCACCTGGGCAAGAAGCGGTCGACGCGCCGGGGCGCTGAGAAGCCGGCTACGGAACGGACGCCCGCGCCGCGCCGCTCGCGCGCGGATGAGCCGGCCGATCCGGCCGCGACAACGCCCCAGCCGGCCCCCGCAACGCCCGAGCCGGCCCCCGCAACGCCCGAGCGCGTGACGGTGTCGGCGGACGACATGACGGTCACCGCGCAGCCGGCCGCGGCCTCGGCGGCGAAGCCCGCCGACGCGCCGGAGGTCGTCATCCTGCCCGCCGACAAGCCCGCATCGGTCGCCGCGGCGAGCGCGGTGGCGCCGACGCAGGCCGCGACCGTCGCGCCGCCGAAGACCGCCGTGCCGGCAAAGACCGCAGCGCCGCCGGCGAAGGCTCCAGCTCCCGCGCCGGCGAAGGGCCCGCCGCCGGCGAAGGCCGCCGAGCCGGAGCCCGGGGCGGACGTCTTGCACCGGCTGGTCCCCGACGCCGACGCGCATCCGGCGCCCGTCGACGATCCCAGCGATCTTCGAGCCCGCCTCGCTCGGACCGCCGCGCTCAAGAAGCCGGGGTCCAAAGAGCGCCAGGACCAGCGCGAATCCTTCCGGGACCTGACGTCCGAACAGTAG
PROTEIN sequence
Length: 549
VGGVRVLGGARVSVFDRFTLDEVSAKIWWPLAMVALVALVLTVPAANHAADRARRESAARAIVISAQQIEPLTATGASVADLNSALADIQRANPTYDAVRVWTPGKLLVASSVPKDPLFGGTAGVSDSDIDGALSTGSRLEVTNREPTGDVGPTTVHTYTKIDGPTAAEVTEFEASDAALLAQVHHDWNGYRIVAAAAFLFLLALALLSMREPVADIGVGVPFYPASLPPNLAIVDAERAVVIEHEDDHVRQRVASLQQRLDESERQRLKAEARLQQALTTLGTGGRNVPGLPPEPPTPTLPPSRTAGRRPTPVDTTAAPAAVAPVVPTTSPVVEPAATAAASSPKHLGKKRSTRRGAEKPATERTPAPRRSRADEPADPAATTPQPAPATPEPAPATPERVTVSADDMTVTAQPAAASAAKPADAPEVVILPADKPASVAAASAVAPTQAATVAPPKTAVPAKTAAPPAKAPAPAPAKGPPPAKAAEPEPGADVLHRLVPDADAHPAPVDDPSDLRARLARTAALKKPGSKERQDQRESFRDLTSEQ*