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H1-18-all-fractions_k255_5852530_4

Organism: H1-18-all-fractions_metab_conc_61

partial RP 32 / 55 MC: 7 BSCG 36 / 51 MC: 6 ASCG 11 / 38 MC: 3
Location: 3749..7117

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 1171.0
  • Bit_score: 971
  • Evalue 5.50e-280
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036E62EF similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 1151.0
  • Bit_score: 975
  • Evalue 2.70e-281
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 1173.0
  • Bit_score: 968
  • Evalue 9.40e-280

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3369
ATGTCGCTCGGATCGCTGGTCGAGACGCTGATCGGGTCGGAGCCGTTCGAGCGGCTCCTGGTGTCCCGCGACCGACCGCTCCTCGCGCAGGCCGAGACCGGCGATGCGTTCGTCGTCGCCGGGCTCGCCGCGGCACTCGAGCTGCCCGTCCTGGCGGTCGCGCCGGGCCCGCACGAGGCGGAGGCCCTGGCGGCGGATGTCGAGGCGTTCCTCCCCGGAGGCTCCGTGTTGTTGCCGGCGTGGGAGGCGTTCCCGTACGAGCTGTTGTCTCCGACGCCGGAGATCGCCGCACGGCGAGCCGCCGCCGTCCGACGGCTGCGGGAGGCGTCAGGCCCGCTCGTCGTCGTCGCGCCCGCCGTGGCGGCGGCCCAGGGGATCGCGCCGAGCACCGGGACGGCCGCGCCGCTCGACGTCGCGACCGGGGACGAGGCGGCGCCCGACACGCTCGCGGACCGGTTGGTTGTGCTCGGGTACGAGCGGGCCGACGTGGTGCAGCGGCGCGGGGAGTTCGCGGTCCGCGGCGGCGTGCTGGACGTCTTCCCGGCGGACGGCCGCCGTCCGATCCGGCTCGAGTTCTGGGGCGACGAGATCGAGTCGATCCGCGTGTTCGTCCCGTCGACGCAGCTGTCGAGCGAGCGGGTCGACCGGGCGACGGTGGATGCGGCGCGCGAGCTGGTGCTCGACGACGACCTCCGCGCGCGGGCGCGTGACGCGGCCGGCGCGGCGAGCGACGAGCGCATCGCGGACCTCTTGGCGCGGATCGGCGAAGGCGCGCTGCCCGACGGCATGGAGTCCGCGGCGGCGTTCCTGTGGGACGAGATGCCGACCCCGGCCGAGCTGCTGCCCGACGGCTCGTGGGTGGTCGTCACCGAGGCTCGCCGCACGCTCGGGCGCCTGCGCCAAACGCATGACGACGCGGAGGCGCTGGCGGCGGCGCTCGCCTGGCCCGGCCCGCACGTCGTCCGTTCTCCTGAGGACGCGCTCGGACGCGGACGTCAGCTCCATCTGTCCGCGTTCACGGAAGGAACGGACCTTTCGCTCCGCGGCTGGGGCGCCGCCGTCGGCGATCCCGGCGCGCTCGCCGGCCAGGCGCGGGACCTCGTCGGCCTCGGCTACCGCGTGGTGGTCGCGGCGCACGGGCACGGGTCGCTGGAGCGGGCGCGCGAGGTGCTCGGCGACCTCGACGTCGAGACGGTCGAGGCGCCGCTCGTCGGCGGGTTCCTGTTCGGCCCCGGCAAGATCGCCGTGCTCACGGAGGAGGACCTGTTCGGCGCCCGCCGGTACACGCGAGAGGCGCCTCGGTTCGCGACCCGGCGCAGCGACAGTGTCGCCGACGAGCTCGAGCCCGGCGACTTCGCGGTGCACCGCATCCACGGCGTCGGGCGGTATCAGGGGATCGTGCACCGCGAGCTCGCGGGCGCCGAGCGCGACTACCTGGTGATCGAGTACGCGAAGGGCGACAAGCTGTACGTGCCCTCAGATGCGGTTGGGATGGTGGCGCGCTACATCGGCGGCGACGTCCCGCGCGTGCACCGGATGGGTGGCTCGGACTGGGCGCGCGCGACGGCGAAGGTCAAGCGTGCCGTCCGCGACATGGCCGGTGAGCTGGTGCGGCTCTATACCGTGCGGATGTCGGTGCCCGGCCATGCGTTCGGTCCGGACACGCCGTGGCAGCGAGAGCTCGAGGACGCGTTCCCGCACGTCGAGACGCCCGACCAGCTCAGGGTGATCGACGACGTCAAGCGCGACATGGAGAAGCCCGTCCCGATGGACCGGCTGCTCTGCGGAGACGTCGGGTTCGGCAAGACGGAGGTCGCCGTGCGCGCGGCGTGCAAGGCGGTGATGGAGGGCAAGCAGGTCGCGGTGCTCGTGCCGACGACGCTGCTCGCCGAGCAGCACCTGCTGACGTTCCGCGAACGGTTCTCGCCGTTCCCCGTGCGCGTCGAGATGCTGTCGCGGTTCGTCGATCCCGAGACGCAGGAGGCGATCATCGCCGACCTGGGCGCCGGGAAGGTCGACATCGTGGTCGGCACCCACCGCCTGCTCGGACGCGATGTGGCCTTCGCCGATCTCGGGCTCCTGGTGGTCGACGAGGAGCAGCGCTTCGGGGTCTCGCACAAGGAACGGTTGAAGTCGCTGCGCGCACAGGTGGACGTGCTCACCATGACGGCGACGCCGATCCCGCGGACGCTCGAGATGGCGCTCACGGGGATCCGACAGATGAGCACGATCGACACACCGCCTGAGGACCGTCAACCGGTGCGGACGTTCGTGGGGTCGTTCGACGAGGAGCTCGCCGTCGGGGCCGTGCGGCGCGAACTCCTGCGCGAAGGCCAGATCTTCTGGGTCCACAACCGCGTCGCAACGATCGACCGGCAGGCCGGACGCTTGCAGCAGCAGCTCCCGGACGCGCGCATCGTCGTCGCCCACGGGCAGATGGACGAAGACGTGCTCGAGCGACGGATGTTGCGGTTCTGGGAACGCGACGCCGACGTCCTCGTGTGCACCACGATCATCGAGTCCGGGCTCGACGTGCCGAACGCCAACACGCTGGTGGTCGACCGGGCCGACATGCTCGGGCTGGCGCAGCTGTACCAGCTCCGGGGTCGCGTCGGGCGCGCCGCCGAGCGCGCGTTCGCGTACTTCTTCTTCCCCGAGCATCGTGAGATGACCGAGGAGGCGCACCTGCGTCTGGCGACGATCTCGAAGCACCAGGCGCTCGGATCGGGGTTCAAGATCGCGCTCCGGGACCTCGAGATCCGCGGAGCCGGCAACCTGCTCGGCGCCGAGCAGAGCGGCCATATCGCCTCGGTCGGGTTCGATGCGTACGCACGGATCCTGCAGGAATCGGTGCAGGAGTTGCAGGGCACACCGGTCGAACAGGAGCAGGACCTGCGGATCGACCTGCCGGTGAAGGCGTTCGTGCCGCCGGGGTGGCTCGCACAGGAGTCCCTGCGTCTGGAGCTCTACCGACGGATCGGGATGGCGCGCGACCACGAGGCGCTCGCGATGATCCGCGACGAGACGCTCGACCGGTTCGGCGCGTTGCCCGACCCGGTCGAGGTGCTGTTCGCGATCGCGTCGCTCCGCCTCACCGCGCAGCGGCTCGCGGTCGAGGAGGTTGCGACCTACCGCGAGCAGGTGCGGTTGCGGCCGGTGACGTTGTCCGATGTGGTGGAGCTCGGCTTGTCGGCGCTGATCCCCGGCGCGTCGTTCGTCGACGCGACGCGAACGCTCAATCTGAAACCCGATCGTGTCTTCGGCGTCGACCTCGTTCGTTGGGTCGAGAGCAGGCTGCTGCAGGCCGTCGGCGAGCCCGCCGAACCGGGGCTCCGGCCGGCCGACCGCGCATCCGTTCGGGCCTCGTAG
PROTEIN sequence
Length: 1123
MSLGSLVETLIGSEPFERLLVSRDRPLLAQAETGDAFVVAGLAAALELPVLAVAPGPHEAEALAADVEAFLPGGSVLLPAWEAFPYELLSPTPEIAARRAAAVRRLREASGPLVVVAPAVAAAQGIAPSTGTAAPLDVATGDEAAPDTLADRLVVLGYERADVVQRRGEFAVRGGVLDVFPADGRRPIRLEFWGDEIESIRVFVPSTQLSSERVDRATVDAARELVLDDDLRARARDAAGAASDERIADLLARIGEGALPDGMESAAAFLWDEMPTPAELLPDGSWVVVTEARRTLGRLRQTHDDAEALAAALAWPGPHVVRSPEDALGRGRQLHLSAFTEGTDLSLRGWGAAVGDPGALAGQARDLVGLGYRVVVAAHGHGSLERAREVLGDLDVETVEAPLVGGFLFGPGKIAVLTEEDLFGARRYTREAPRFATRRSDSVADELEPGDFAVHRIHGVGRYQGIVHRELAGAERDYLVIEYAKGDKLYVPSDAVGMVARYIGGDVPRVHRMGGSDWARATAKVKRAVRDMAGELVRLYTVRMSVPGHAFGPDTPWQRELEDAFPHVETPDQLRVIDDVKRDMEKPVPMDRLLCGDVGFGKTEVAVRAACKAVMEGKQVAVLVPTTLLAEQHLLTFRERFSPFPVRVEMLSRFVDPETQEAIIADLGAGKVDIVVGTHRLLGRDVAFADLGLLVVDEEQRFGVSHKERLKSLRAQVDVLTMTATPIPRTLEMALTGIRQMSTIDTPPEDRQPVRTFVGSFDEELAVGAVRRELLREGQIFWVHNRVATIDRQAGRLQQQLPDARIVVAHGQMDEDVLERRMLRFWERDADVLVCTTIIESGLDVPNANTLVVDRADMLGLAQLYQLRGRVGRAAERAFAYFFFPEHREMTEEAHLRLATISKHQALGSGFKIALRDLEIRGAGNLLGAEQSGHIASVGFDAYARILQESVQELQGTPVEQEQDLRIDLPVKAFVPPGWLAQESLRLELYRRIGMARDHEALAMIRDETLDRFGALPDPVEVLFAIASLRLTAQRLAVEEVATYREQVRLRPVTLSDVVELGLSALIPGASFVDATRTLNLKPDRVFGVDLVRWVESRLLQAVGEPAEPGLRPADRASVRAS*