ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H1-18-all-fractions_k255_6250505_18

Organism: H1-18-all-fractions_metab_conc_61

partial RP 32 / 55 MC: 7 BSCG 36 / 51 MC: 6 ASCG 11 / 38 MC: 3
Location: 14853..15971

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQB7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 394.0
  • Bit_score: 397
  • Evalue 1.00e-107
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:EKP95132.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 394.0
  • Bit_score: 397
  • Evalue 1.40e-107
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 379.0
  • Bit_score: 384
  • Evalue 2.50e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1119
GTGACCGACGTCGTCTTCGAGAACGTCTCCAAGGTCTTCCCGGGCCCGATGGTCGCGGTCGACGATCTGTCGCTCGACGTCGGCGACGGCGAGTTCTTGATCCTCGTCGGGCCTTCGGGGTGCGGGAAGTCGACGGCGCTTCGCATGGTCGCGGGGCTCGAGAAGATCAGCGCTGGCAAGATCGTCGTCGGCGGCGAGGTGATCAACGACATCCCGCCGAAGGACCGCGACATCGCGATGGTGTTCCAGAACTACGCCCTGTATCCGCACATGACGGTCGAGAAGAACCTCGGGTTCGCCCTGCGCCAGCGCAAGATGCCGAAGGACGAGCTCGACCAGCGCGTCCATTCCATGTCCGAGCTGCTCGGCCTGGAGGAGCTGATGAAGCGCCGGCCCGGGCAGCTCTCGGGCGGGCAGCGGCAACGCGTGGCGATGGGCCGGGCGCTCGTCCGGGAGCCGCGAGTGTTCCTGCTCGACGAGCCGCTGTCGAACCTCGATGCGAAGCTCCGGGTGCAGATGCGTGCGGAGCTGAAGAAGCTGCATCACCGGCTCGAGATCACGACGATCTACGTCACGCACGATCAGGTCGAGGCCATGACGCTCGGCGACCGGATCGCGGTGTTGTCCGCAGGCAAGCTCCAGCAGCTCGGCGCACCGCAGGACGTGTACGACCGCCCGGCGAACGTGTTCGTCGCCGGGTTCATCGGATCGCCGCCGATGAACCTGCTCCAGGGCACGGTGCGCGACGGCCAGGTCGAGGCGGGCGACCTCACGTTCGCGCGCGACGGCCTGACCGACGGCACGGTGATCGTCGGCATCCGGCCTGAGGGCCTTCGACCGGTCGGTGACACCGACCCCGGGCCCGGGTTGGCGGTGCAGGTCGACGTCGTCGAGCCGCTCGGCGACGAGGTCCTGGTGCACGGGACGGTCGCGGCGCGCGACGCGGGCGTGAAGATCGAGCCCGAGGAGGCGACGCTGCTGGTCCAGACGTCGGATCGCGCGGCGGTGACCGTCCGGCTGGAGCCCGACATGCGACCCGCCGAACGAAGCACGCTGCACCTGCACGTCGATCCCATCACGGTGCACCTGTTCGACGCGGCCACGGGCGCGGCGCTGTAG
PROTEIN sequence
Length: 373
VTDVVFENVSKVFPGPMVAVDDLSLDVGDGEFLILVGPSGCGKSTALRMVAGLEKISAGKIVVGGEVINDIPPKDRDIAMVFQNYALYPHMTVEKNLGFALRQRKMPKDELDQRVHSMSELLGLEELMKRRPGQLSGGQRQRVAMGRALVREPRVFLLDEPLSNLDAKLRVQMRAELKKLHHRLEITTIYVTHDQVEAMTLGDRIAVLSAGKLQQLGAPQDVYDRPANVFVAGFIGSPPMNLLQGTVRDGQVEAGDLTFARDGLTDGTVIVGIRPEGLRPVGDTDPGPGLAVQVDVVEPLGDEVLVHGTVAARDAGVKIEPEEATLLVQTSDRAAVTVRLEPDMRPAERSTLHLHVDPITVHLFDAATGAAL*