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H1-18-all-fractions_k255_7330574_4

Organism: H1-18-all-fractions_metab_conc_61

partial RP 32 / 55 MC: 7 BSCG 36 / 51 MC: 6 ASCG 11 / 38 MC: 3
Location: comp(1236..2171)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN98_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 288.0
  • Bit_score: 270
  • Evalue 1.20e-69
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 288.0
  • Bit_score: 270
  • Evalue 3.40e-70
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 308.0
  • Bit_score: 563
  • Evalue 1.30e-157

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGCCGGATCCGGCTCGTCCCCTAGGGACCGACGACGCAGATGACCTTCGCCTCTACCTGGAGGCAGCGGCTCGCGAGCCGCTGCTCACCAAGGAGGAAGAGGTCGAGCTCGCCATGACCATCGAAGGCGGCAAGGAGGGCGAAGAGCGCCTCCGCGCCGGCCGTCTGCGTTCCGAAAAGTCCATCGCCAAGGCCCGTGCCGAGGTGCGCAAGGCCGAGGCCGCCCGCCAGCGGTTCATCATGGCCAACCTCCGGTTGGTCGTGTCGGTGGCCCGCAAGTACCAGGGTCAGGGCCTACCCCTGCTGGACCTGATCCAGGAGGGCAACATCGGCTTGATGCGTGCCGTCGAGCTCTTCGACTGGCGCCGCGGCTTCAAGTTCTCCACGTACGCAACGTGGTGGATCCGCCAGGGCATCACGCGTGCGATCGCGGATCGTTCGCGCTCGATCCGCCTGCCGGTGCACATCCACGACCGGCTCCGCAAGCTGAACCGCACGCGGTTCCAGTTCGCGCAGTCGGTCGGCCGTGAGCCCACGCGCGAGGAGCTTGCCAAGGCCCTCGACACCACGGTGGACGAGATCGACGACCTCACCGAGATGGGCCGCCGTGAGCCGCTCTCGCTGCAATCGCCCGTGGGCGAAGACACCGAGCTTGGCGACCTGATCGAGGAGATCGACTCCGACGCGGGGTTCAACGAGGTCGAGGACCAGCTGCTCCGCGAGGAGATCGGTGGCGCCGTCGACCAGGTGCTCGACGACCGTGAGCGCCACGTCGTGGCGCTGCGCTACGGGCTCGAGAACGGCCAGCCGCTCAGCCTTCGTGAGACGGGCAAGGTGCTCGGCCTGTCGGGCGAGCGGGTGCGCCTGATCGAGCGCGAGGCGCTGCGCAAGCTGCGCGACTCGAACCTCATCAACGCGGTGGCGCTGGGCAACTAA
PROTEIN sequence
Length: 312
VPDPARPLGTDDADDLRLYLEAAAREPLLTKEEEVELAMTIEGGKEGEERLRAGRLRSEKSIAKARAEVRKAEAARQRFIMANLRLVVSVARKYQGQGLPLLDLIQEGNIGLMRAVELFDWRRGFKFSTYATWWIRQGITRAIADRSRSIRLPVHIHDRLRKLNRTRFQFAQSVGREPTREELAKALDTTVDEIDDLTEMGRREPLSLQSPVGEDTELGDLIEEIDSDAGFNEVEDQLLREEIGGAVDQVLDDRERHVVALRYGLENGQPLSLRETGKVLGLSGERVRLIEREALRKLRDSNLINAVALGN*