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H1-18-all-fractions_k255_7660776_4

Organism: H1-18-all-fractions_metab_conc_61

partial RP 32 / 55 MC: 7 BSCG 36 / 51 MC: 6 ASCG 11 / 38 MC: 3
Location: comp(1554..2216)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T6_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 219.0
  • Bit_score: 202
  • Evalue 3.70e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 219.0
  • Bit_score: 202
  • Evalue 1.00e-49
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 211.0
  • Bit_score: 227
  • Evalue 1.50e-56

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCGGGCCATGCCCGAGCAGCAGGTCGTTGCGTCGTCCCCGGACGCAGCCGTGATCGCGCGCCTCCTGCAAGGTGACGAGACGACGTTCATGATGCTCGTGGACCAGCATCAACCGGCGATGCTGCGCCTTGCCCAGATGTACGTCTCGTCGCGCGCGGTCGCCGAGGAGGCCGTCCAGGAGGCGTGGATCGGCATCCTCAAGGGCCTCCCCTCGTTCGAGGCGCGGTCGTCGCTTCGGACGTGGATGTACAAGATCGTCACGAACGTCGCCAAGACGCGGGGTGTGCGCGAAGGCCGTTCGCTCCCCTTCTCGTCGTTGTCGCGCGACGACGACGCCGATCCGATCGATCCGTCGTGGTTCCAAGGCCCCGACGACCCGTTCCCGGGGGGATGGCGGACGTTCCCCGACGACTGGCGAGGGATCCCCGAGGATCGGCTGCTCGGTCGGGAAACGTTGGACCACATCTCTCGGGCGCTGGACGCCATGCCCGCGATGCAGGCCGAGGTCGTGCGGCTCCGTGATGTGCTGGGTTGGTCCTCCGACGAGGTGTGTAACGCCCTGGACCTCACCGAGACCAACCAGCGGGTGTTGCTGCACCGCGGCCGGAGCCGGATCCGTCGCGACCTCGACACCTACCTGTCAGAGGGACGGGATCGATGA
PROTEIN sequence
Length: 221
MRAMPEQQVVASSPDAAVIARLLQGDETTFMMLVDQHQPAMLRLAQMYVSSRAVAEEAVQEAWIGILKGLPSFEARSSLRTWMYKIVTNVAKTRGVREGRSLPFSSLSRDDDADPIDPSWFQGPDDPFPGGWRTFPDDWRGIPEDRLLGRETLDHISRALDAMPAMQAEVVRLRDVLGWSSDEVCNALDLTETNQRVLLHRGRSRIRRDLDTYLSEGRDR*