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H1-18-all-fractions_k255_3205834_14

Organism: H1-18-all-fractions_metab_conc_71

partial RP 25 / 55 MC: 1 BSCG 31 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(12179..12646)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Patulibacter medicamentivorans RepID=H0E4Z9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 160.0
  • Bit_score: 94
  • Evalue 1.00e-16
RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 164.0
  • Bit_score: 89
  • Evalue 7.00e-16
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 149.0
  • Bit_score: 107
  • Evalue 1.20e-20

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGGCCCGCGCCGGAGTCCCGCCCTTCGAGCTGTTCTACGAGTCCCACAGGGGCGAGGTTCTCGCCTTGCTCCGCCGGCGGGCCGGCCGCGAGCGGGCGGAGGACCTCTTCCAGGAGACGTTCCTGCGCGCCCTGCGCGCGTACGGGCGGCTCGAGCACGGCGAGCATCTGCGCGCGTGGGTACTGACGATCGCCGCGAACACGGTGATCGATGCGGCGCGGCGCGAGCGGCCCGCCGCCGAGCTGGCGGTCGAGCCGGCGGGCGAGGACGAGCGTCCCGCCGTCGAGGACCTTGCGCCGCTGACCGACGGCCTGCCGCCGAAGGAGCGAGCGGCGGTCGTCCTCCGCTACGGCTACGACCTCGACTACGACACGATCGGCGCCGCCCTGGGCTCGAACGAGCAAGCGGCCCGACAGGCGGCCTCCGCCGGCGTGCGGCGGCTGCGGAAGGAGAAGGAGCAGCGATGA
PROTEIN sequence
Length: 156
MARAGVPPFELFYESHRGEVLALLRRRAGRERAEDLFQETFLRALRAYGRLEHGEHLRAWVLTIAANTVIDAARRERPAAELAVEPAGEDERPAVEDLAPLTDGLPPKERAAVVLRYGYDLDYDTIGAALGSNEQAARQAASAGVRRLRKEKEQR*