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H1-18-all-fractions_k255_1109004_16

Organism: H1-18-all-fractions_metab_conc_71

partial RP 25 / 55 MC: 1 BSCG 31 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(13170..13694)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M6E6_GRAFK similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 155.0
  • Bit_score: 82
  • Evalue 2.60e-13
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 155.0
  • Bit_score: 82
  • Evalue 7.30e-14
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 148.0
  • Bit_score: 134
  • Evalue 8.10e-29

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCGAAGCCCGCTAAAGGAACCGGGGCCACCTAGCCTCTACCTGTCAGTGGACGCCCTAAGGGCCGAGATCGAGCAGCTCTACCGGGAGCGATTCGTCGGTTTCCGGAACGGAGTTGCGACCGTCACCGGCGACTACGAAAGCGCGCGGGACGCGGTGCAGGAAGGTTTCGCGCGCGCGCTTCGATCGGCTGCCCAGTTTCGCGGTGAGGGGTCGCTCGAGGGTTGGCTGTGGCGGATCGTCTTCCGCGTCGCGCTCGAGCAGCACCGGGACGAGGCGCGGCTGCCTTTCGACGAGATCGAAGTCGACTTCGTCGAGCCCGAGCGTGATCCCGCCCTGGCGAAGGCCCTGTCAGGGCTTCCGCCGCGGCGGAGGCTGATCGTGTTTCTGCGCTATTTCGCCGACCTCGACTACGCGACGATTGCCGAGGTCTGCGAGATCGAGGAGGGCACGGTCGCCGCGACGTTGGCGCAGGCCAGGCAGGCGCTGGCCTCGATCCTGGACGAGGAAGGAGTCCGACGATGA
PROTEIN sequence
Length: 175
MRSPLKEPGPPSLYLSVDALRAEIEQLYRERFVGFRNGVATVTGDYESARDAVQEGFARALRSAAQFRGEGSLEGWLWRIVFRVALEQHRDEARLPFDEIEVDFVEPERDPALAKALSGLPPRRRLIVFLRYFADLDYATIAEVCEIEEGTVAATLAQARQALASILDEEGVRR*