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H1-18-all-fractions_k255_1294615_13

Organism: H1-18-all-fractions_metab_conc_71

partial RP 25 / 55 MC: 1 BSCG 31 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(13539..14072)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UX17_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 169.0
  • Bit_score: 143
  • Evalue 1.60e-31
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EGD42429.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 169.0
  • Bit_score: 143
  • Evalue 2.30e-31
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 185.0
  • Bit_score: 141
  • Evalue 2.30e-31

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Taxonomy

Nocardioidaceae bacterium Broad-1 → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGCAGACGTCGTTGACCGGGAGGCCAGGTTTCGCCGCGTGTGCGACGCGCACACGGCGGCGGTTCTCGCCTACGCGCTGAGACGCACCTCGCGGGAGGACGCGGCCGACGTGGTCGCCGAGACCTTCCTCGTCGCGTGGCGTCGCCTCGACGACGTCGACGAGCGGACCGCGCTCCCCTGGCTCTATGCGGTCGCACGGAGGGTGCTGCTGAGCCAGCAGCGCGCGACGAGGCGGCAGCAGGCGATCGTGCAGCGCGTCGCCGCCGGGTTGCCCGAGGCGCCGGACACGCCGTTGGGGTCGCCGCGCGTTCTCGAGGCCCTCGCCGCGCTGTCGGAGGCCGAGCGCGAGGTGCTGATGCTCGCGGCCTGGGAGGAGCTCTCGAGCAGCGAGGCCGCCCGGGTACTCGGCTGCTCGGCGACGGCCTACCGGATCCGCCTGCATCGCGCTCGTAGGCGGCTGCGCGAGCGCCTCGACGACCGCCTCCAGCCACTGGTTGCTTCCGCCCGCTCCGAGGAGAGCCCCTCATGCTGA
PROTEIN sequence
Length: 178
VADVVDREARFRRVCDAHTAAVLAYALRRTSREDAADVVAETFLVAWRRLDDVDERTALPWLYAVARRVLLSQQRATRRQQAIVQRVAAGLPEAPDTPLGSPRVLEALAALSEAEREVLMLAAWEELSSSEAARVLGCSATAYRIRLHRARRRLRERLDDRLQPLVASARSEESPSC*