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H1-18-all-fractions_k255_6135779_35

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(30664..31533)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED93 similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 288.0
  • Bit_score: 418
  • Evalue 4.30e-114
regulatory protein GntR similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 287.0
  • Bit_score: 362
  • Evalue 1.00e-97
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABP52557.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 287.0
  • Bit_score: 362
  • Evalue 5.20e-97

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 870
GTGAACGCGCTGCTGGATGACCTAGAGGACCTGGACCCGGACGACTCGCGTACGCCCTCGCAGCAGATAGCGAGCGTGCTGCGGGCAGCCATCAAGACAGGCCGGCTCACGCCTGGTGCGCGGCTGCCGTCACAGCCTGATCTAGCCAGGCGGTACGGCGTGGCACGCGAGACGGTCAAGGCCGCACTCAGGGTGCTGACGGTCGAGCGCCTCATCGTTAGCCGGCAGGGGAGCGGTGTCTTCGTGCGGGCACAGACAGAGCTGCCGGTAGGGCTCCGACCGCACATTGAAGCGGCCTTCAAGCGCCCCCATGTGTCGATCGACTTCGCCGGCTTCTCCGGCGAGACCCTCAGCAACACGTTGTCGGAGGTGCTCGACAAAGTCCGAGCTGGCCGGCTCACGCCGGAGTCGATCAGTGTGCGGGTCATGCTGTCCGACACGGCGGTTCCACTCGCCTTGCCGTGCCGCGCCGACACGGCCGCCGACGATGAGGCTGTCAGGCGTCGGTCTGACCGGATCACCCGACGGGCAGTTGAGGGCATAGTGGCCGGTGTCGAGGAATTGGCCGACCTCAGACTAGTACAGTCTGCCACCGCCGAGATCCGCGTTCACAGTGCCTCGCCTCTTTTCAAGCTCTATATCATCAACAACGAAGAGGCATTCTTCGGCTTCTATCCGGTGCTCGAACACAAGGTGAAGATCGACGGCCACCCCGTCTCTATCTTCGATCCAATGGGCAAGGATGCGGCCCTGTTCCACTTCTCGGTGAACGACGAACAAGGCGACTCGACAGCGGCACTGTACGTTGACCAGGCTCGGATCTGGTTCGAATCGCTCTGGCGCACTATCACTCGTGAGTACCCAGCATGA
PROTEIN sequence
Length: 290
VNALLDDLEDLDPDDSRTPSQQIASVLRAAIKTGRLTPGARLPSQPDLARRYGVARETVKAALRVLTVERLIVSRQGSGVFVRAQTELPVGLRPHIEAAFKRPHVSIDFAGFSGETLSNTLSEVLDKVRAGRLTPESISVRVMLSDTAVPLALPCRADTAADDEAVRRRSDRITRRAVEGIVAGVEELADLRLVQSATAEIRVHSASPLFKLYIINNEEAFFGFYPVLEHKVKIDGHPVSIFDPMGKDAALFHFSVNDEQGDSTAALYVDQARIWFESLWRTITREYPA*