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H1-18-all-fractions_k255_6250148_36

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 39958..40611

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1GEP4_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 209.0
  • Bit_score: 347
  • Evalue 5.40e-93
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 208.0
  • Bit_score: 350
  • Evalue 8.90e-94
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 209.0
  • Bit_score: 347
  • Evalue 2.60e-93

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGGAATTTCGCTGGAAGGGAGCGCGGTGCCGAGCACCGAAACCCAGGCCAACGCCAGGCCAGAGACTCCGGCGGAGCGGGCCGAACGGTTCGAACGGGACGCGCTGCCACTGCTCGACCAGCTCTACTCCGCCGCCCTGCGGATGACCCGGAACCCCGCCGATGCCGAGGATCTGGTCCAGGAGACCTATCTCAAGGCGTACGCGGCGTTCGAGTCGTTCCGGGTCGGGACCAACCTCAAGGCTTGGCTCTACCGGATCCTCACCAACACCTACATCAACGGGTACCGCAAACGGCAACGTCAGCCGGTCCAGCAGCCGACCGAGGAGATCACCGACTGGCAGCTCGCCCAATCGGAGAGCCACACCTCATCCGGCCTGCGCTCGGCCGAGTTGGACGCGATGGACCGGCTGCCGGACGTCGATGTGAAGACGGCGCTTCAGGAGCTTCCCGAGGAGTTCCGGTTGGCGGTGTACCTTGCTGACGTCGAAGGCTTCGCCTACAAGGAGATTGCCGAGATCATGGGCACGCCGATCGGCACCGTGATGTCCCGCCTGCACCGGGGCCGGCGCATGCTGCGCGACCTGCTGTCGGATGTGGCGCGTGAGCGCGGGTTTTTGCGTTCGGCCGAGCGAGAGGTGGCCGGGTCATGA
PROTEIN sequence
Length: 218
MGISLEGSAVPSTETQANARPETPAERAERFERDALPLLDQLYSAALRMTRNPADAEDLVQETYLKAYAAFESFRVGTNLKAWLYRILTNTYINGYRKRQRQPVQQPTEEITDWQLAQSESHTSSGLRSAELDAMDRLPDVDVKTALQELPEEFRLAVYLADVEGFAYKEIAEIMGTPIGTVMSRLHRGRRMLRDLLSDVARERGFLRSAEREVAGS*