ggKbase home page

H1-18-all-fractions_k255_7053092_10

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(7860..8897)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter substrate-binding protein n=1 Tax=Actinomadura atramentaria RepID=UPI00037FD38C similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 355.0
  • Bit_score: 325
  • Evalue 5.90e-86
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJK33847.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 357.0
  • Bit_score: 338
  • Evalue 7.30e-90
rhamnose ABC transporter periplasmic rhamnose-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 360.0
  • Bit_score: 316
  • Evalue 6.00e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGCGAACCCGATTCCTTGGCGCGCTCGCCGCAGCGGCAGCCGTCCTCATCTCCCTGACCTCCTGCGCCGACGACAGTGGCGGCGGCAGTGGTGGTGGTGGTGCGCCCGCGTCGAGCGGCGGCGGGGTCAAGAGCGGCCTCAAGATCGCGGTGTTGCCCAAGGCGGTGAACATCCCGTACTTCGACGCGGCCTACGCCGGAGCCAAGAAGGCGTGCCAGGAACTGGCCGCGCAGTGCGACCAGGTCGGCCCGACCGAGGCGAGCGGCTCGGCTCAGGTGCAGTTCATCAACACGGTGATCCAGCAGCAGTACAACGCGCTGGTGATCTCCGCCGCGGACGCCAACTCCGTGGTGCCCGCGCTGAAGCAGGCCAAGAGCGCCGGCATCACCGTGATCACCTATGACGCCGACGTCGCCGATCCGTCGGCCCGCTCGGCGATGATCCGCCCGACCACCACCGACCTGGTCGGCAAGGCGCAGCTCAAGTGGATCTCCGACGCGATCGGCTCGGCCGGCGGCGAGATCGCCATCCTGTCCGCGGCCGCCACCGCGGAGAACCAGAACGCCTGGATCGCCGTGATGAAGCAGGAACTGACCAACTACCCGCAGCTCAAGCTGGTTGACACGGTCTACGGCGACGACGACGCGGCGAAGTCCGCGGAGAAGGCGTCCGGGCTGCTCCAGTCGCACCCCAACCTCAAGGGCATCATCTCGCCGACCACGGTCGGCATCGCCGCCGCCGGGCAGTACCTGAGCGGTTCGCAGTACAAGGGCAAGGTGGCGCTGACCGGGCTCGGCCTGCCCAGCCAGATGAAGGCCTACGTCAAGGACGGCACGGTGAAGACGTTCGGGCTGTGGGATCCGGCGATGCTCGGCTACCTCGGGGTGTACGCGGCCGCCGACGTGGCCAGCGGCATCGACATCGCGAAGGGCTTCGAGGCAGGCGGCAAGAAGTACGCCGTCGAGGACAAGGGGCTGGTCACGGTCGGCCCGCCGCAGGAGTTCACCGCGCAGAACATCGACAGCTTCAACTTCTGA
PROTEIN sequence
Length: 346
MRTRFLGALAAAAAVLISLTSCADDSGGGSGGGGAPASSGGGVKSGLKIAVLPKAVNIPYFDAAYAGAKKACQELAAQCDQVGPTEASGSAQVQFINTVIQQQYNALVISAADANSVVPALKQAKSAGITVITYDADVADPSARSAMIRPTTTDLVGKAQLKWISDAIGSAGGEIAILSAAATAENQNAWIAVMKQELTNYPQLKLVDTVYGDDDAAKSAEKASGLLQSHPNLKGIISPTTVGIAAAGQYLSGSQYKGKVALTGLGLPSQMKAYVKDGTVKTFGLWDPAMLGYLGVYAAADVASGIDIAKGFEAGGKKYAVEDKGLVTVGPPQEFTAQNIDSFNF*