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H1-18-all-fractions_k255_2715854_24

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(16368..17351)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PK79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 318.0
  • Bit_score: 455
  • Evalue 3.60e-125
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 319.0
  • Bit_score: 434
  • Evalue 1.90e-119
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 319.0
  • Bit_score: 434
  • Evalue 9.20e-119

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Taxonomy

Stackebrandtia nassauensis → Stackebrandtia → Glycomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGACGGAGCGGTCAGAGGAATTCGTGCGGCAGACTGAGCCGTTGCGGCGCGAGTTGCTGGCGCACTGTTACCGCATCGTCGGCTCGGTGGATGAGGCCGAGGACTTGGTGCAGGAGATGTACTTGCGGGCATGGCGGTCGTACGACACTTTCGAGGGCCGCTCCTCGCTGCGCACCTGGCTCTACCGCATCGCCACCAACGCCTGCCTGTCCATGCTGGAACAGCGCGGCCGGCGGGTGTTGCCCTCTGGCCTGGGCGCTCCGGCCGACGATCCTGATGCGCCGCCAGGCCCGGCCGAGCCCGAGGTGGCCTGGCTGGGGCCGGTTCCGGACGCTGTGATGACCCTCGAGACCCGCGACCCTGCCACGCTTGTCACGGCGCGTGACAGCGTGCGGCTGGCGCTCGTCGCCGCCCTGCAGTACCTGCCGGCCCGGCAACGAGCCGTCCTCCTACTCCGGGAGGTGCTGGGTTTCAGCGCCGGCGAGGTCGCGGCCATGTTCGGGGTCTCGACCGCCGCGGTCAAGAGCGCGCTGCAACGAGCCCGCGCCCGGCTCGATGAGGTGGCGCCCTCACCCGAGAGCGTCATCGAGCCGACCGAACCGCACGCCAGAGACCTGCTGTGCCAATACATCGCCGGTTTCGAGAACGCCGACATGACAGCCCTGGAGAAGGCGCTGCGCACCGACGCCGCCATCGAGTTGGTGGGCACGCGGACCTGGTTCTCCGGCAAGGTGACGTGCCTGCGCTACCTCGCGCATGTGATCGGATCTCCTGGCGACTGGCTGATGACCCCGACCCACGCCAATGGCCAACCTGCCGCAGCCACCTACTACCGCACCGCCGACGGAACCCATCAGGCCCTCGGGGTCGCGGTTCTCACCATCGCCCACACCGGCATCGCCCGCATCACCGTCTTCCCCGGCGGTCCGGGCCTCGTGACGAGATTCGGTCTTCCCTCCTCCCTCCCGGGTCGCCGGTCATAG
PROTEIN sequence
Length: 328
MTERSEEFVRQTEPLRRELLAHCYRIVGSVDEAEDLVQEMYLRAWRSYDTFEGRSSLRTWLYRIATNACLSMLEQRGRRVLPSGLGAPADDPDAPPGPAEPEVAWLGPVPDAVMTLETRDPATLVTARDSVRLALVAALQYLPARQRAVLLLREVLGFSAGEVAAMFGVSTAAVKSALQRARARLDEVAPSPESVIEPTEPHARDLLCQYIAGFENADMTALEKALRTDAAIELVGTRTWFSGKVTCLRYLAHVIGSPGDWLMTPTHANGQPAAATYYRTADGTHQALGVAVLTIAHTGIARITVFPGGPGLVTRFGLPSSLPGRRS*