ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H1-18-all-fractions_k255_4096941_22

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(21233..22756)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Amycolatopsis alba RepID=UPI00036EB808 similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 502.0
  • Bit_score: 732
  • Evalue 2.40e-208
Putative transmembrane efflux protein {ECO:0000313|EMBL:CEL19643.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 490.0
  • Bit_score: 740
  • Evalue 9.40e-211
MFS transporter multidrug efflux transporter similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 500.0
  • Bit_score: 731
  • Evalue 1.10e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
GTGACCGCCGCGGTCGGCGTGATCCGCTGGGGTACCCCGGTCGCCAGGGGAGTGCTGGCGACCACGATCCTCGGCTCCGGCATGGTGTTCCTGGACAGCACGATCGTCAACGTCGCGCTGCCGAGGATCGGAACCGAGCTGGGCGCCTCGATCGCCGGTCTGCAGTGGATCCTCGACGGCTACCTGCTCTCCCTCGCCGCGCTCATCCTGATCGCCGGCTCGCTCGGCGACCGCTACGGCCGGCGCAAGGTGTTCACCATCGGGGTGGTCTGGTTCGGCGCCGCCTCGGTGCTCTGCGGACTGGCCCAGACCACCGGCATGCTGGTCACCGCCCGGGTGTTGCAGGGCATCGGCGGCGCGCTGCTCACCCCCGGTTCACTGGCGATCATCCAGGCCTCGTTCGCCCGCGAGGACCGGGCCAGGGCGATCGGCGCCTGGTCCGGCCTCGGCGGCATCGCCGGCGCGATCGGGCCGCTGGTCGGCGGGCTGGTCGTGCAGGTGTGGTCCTGGCGGCTGGCGTTCCTGATCAACCTGCCGCTCGCCGCGCTCTGCGTCTGGCTGGCCAGGCGCTACGTGCCGGAGTCCTGCGACCAGCGGATGGGCCGGGGACATCCGGACGCGATCGGCTCCGCGCTCGGCGCGCTCGGCCTCGCCGGGCTGACCGCCGCGCTCGTCGAGGCGCCCGGCCGGGGCGTCGGCGATCCGCTGGTCGTCGTGTCCGGCGTGGTCGGACTGCTCGCCCTGGCCGCGTTCGTGGTGCTGCAACTGCGTGAGCGTGACCCGCTGGTGCCGCCGGACATGTTCGCCAACCGCACGTTCACGCTGGCCAACGTGCTGACCTTCGTGGTGTACGCGGCGCTGAGCGGCGTGATGATGCTGTTCGTCATGCAGTTACAGGTCTCGCTCGGCTACTCGCCGACCGTCGCCGGGCTCTCCGGGCTGCCGATCACGGTGATCATGCTGCTGTTCTCGGCAAGGGCCGGCAAGCTCGCCCAGCGCTACGGGCCGCGCTGGTTTCTGGTGATCGGCCCGGTCGTGATCGCGCTCGGCATGCTGCTGCTCACCCGGGTCGTCCCGGGCGCCTCCTACTTCGGCACGGTGCTGCCCGCGGTGTCCGTGTTCGGGCTCGGCCTCGCCTGCGTGGTCGCGCCGGTCACCGCAACCGTGCTGGCCGCCGCCGAGGACCGGCACGCCGGCGTGGCGTCCGGGGTGAACAACGCCATCGCCAGGACCGGCGGCCTGATCGCGGTCGCCGTGCTGCCCGCCGCCGCCGGGCTGACCGGCGCCGGCTACACCGACCCGGCGCAGCTCACCGCGGGCTGGCGCACCGCGATGGTGCTCTGCGCGGTGGTGTGCGCGCTCGGTGGCCTTGTCGCGCTGGGCATCCGCAATGACGTGCTCGCCGAGCAGCCGGCCGGGGACGAGGTGGCCGAGGCGCCGCACCCCGGTGACTGTCTGCACTGCGGGGTGTCGACGCCGCCGACGCATGTCGTCCCGGCGCACCGGATGTCCGCGGCGTCCTGA
PROTEIN sequence
Length: 508
VTAAVGVIRWGTPVARGVLATTILGSGMVFLDSTIVNVALPRIGTELGASIAGLQWILDGYLLSLAALILIAGSLGDRYGRRKVFTIGVVWFGAASVLCGLAQTTGMLVTARVLQGIGGALLTPGSLAIIQASFAREDRARAIGAWSGLGGIAGAIGPLVGGLVVQVWSWRLAFLINLPLAALCVWLARRYVPESCDQRMGRGHPDAIGSALGALGLAGLTAALVEAPGRGVGDPLVVVSGVVGLLALAAFVVLQLRERDPLVPPDMFANRTFTLANVLTFVVYAALSGVMMLFVMQLQVSLGYSPTVAGLSGLPITVIMLLFSARAGKLAQRYGPRWFLVIGPVVIALGMLLLTRVVPGASYFGTVLPAVSVFGLGLACVVAPVTATVLAAAEDRHAGVASGVNNAIARTGGLIAVAVLPAAAGLTGAGYTDPAQLTAGWRTAMVLCAVVCALGGLVALGIRNDVLAEQPAGDEVAEAPHPGDCLHCGVSTPPTHVVPAHRMSAAS*