ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H1-18-all-fractions_k255_50127_79

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 77524..78726

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4Z2_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 407.0
  • Bit_score: 241
  • Evalue 7.70e-61
Uncharacterized protein {ECO:0000313|EMBL:KJK55652.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 403.0
  • Bit_score: 264
  • Evalue 1.50e-67
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 407.0
  • Bit_score: 241
  • Evalue 2.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GTGGTGGATCTGCCGACCGAGCTGACCATCGGCGAACGGGTCGCCCGCGCCCGCTTCGCGCGCGGAGTCAGCCAGGAAGCCCTGGCCGGCCTCATGGGCCGGTCGCCGAGCTGGATGTCCAAGATCGAGCGTGGCGTGCTACCCCTGGACCGAAAGTCCGTGCTGCTCAAGCTGGCCGAGGTCCTGGAGGTCGACGCCAACGTCCTGGAAGGCCGCAGCCAGGCGCTGCCCGTTCCTGGTGAGCATGGCCGGGCCGTTGTCGTCGGTGAACTGCGGCAAACCCTGATGCGGTGGGCGACACCGGCGATCAGCCCGCCACATGCCGGGCCCCGGCACACGATCGAGGAGTTGCGGCAACGCGTCAACCAGGCCAACCGGCTGCGCCAGGACGCCCGTTTCGCCGACTTGGTCGTGTCACTTCCGGCGCTGCTGGATGATCTGCGGGACGCGGCCGGTGGCGAGGCCGACCGCAACGCCGTACGCACCATGGCCGCCGAAGCGATGCACGACGCGCGGGCGATGACCAAGAAACTCGGCCACCTGGACCTGGCCTGGATGGCGGCCGAGCTGGCGGGGCACGCGGCCCGCCAGACCGATGATCCCCTGCTGGCCGCCGCCAATGCCTGGAACCACATCGAGGTCTACAAGGCGGCCAACGCGCCCGGTCCCGCGCGGGCCCTGGCGCTGGCCACCATCGACCAACTCGCCGACACCCTGGGCACGGCCACACCGGGTCACCTGAGTCTGTGGGGCACCATGCACCTGCAAGCCGCGCTGATCGCCGCGTACTGGAGCAACCGCGAGGACGCCACCACGCACCTACGGGAAGCAACCGACGCGGCCCGGCGGCTGGGTGGCGATGCCAACCACTACGACACCATGTTCGGCCGTACCAACGTGGCAATCCACCAGGTCGCCGTCGCCGTCGAGCTGGGTGATGCGAAACGGGCGGTCGACCACGGCGCCAAGATCAACGCCGCCGGCCTTGGCCGGGAGCGGCGCGCCCGCCTGGCCATCGACCTCGCCCGCGCCTACGAGCACACCCGCAAGCACGACGACGCCCTGGCCTCGCTGCTGGCCGCCGAGAAGCTCGCACCCGACTACGTGCGCCCACACCCCCTCGTGCGCGAGATCGTCGGCGCCCAACTGCGCCGCGCCCGACCGGAACTGCGCTCCTTCGCCAAACGAATCGGGATCATGTGA
PROTEIN sequence
Length: 401
VVDLPTELTIGERVARARFARGVSQEALAGLMGRSPSWMSKIERGVLPLDRKSVLLKLAEVLEVDANVLEGRSQALPVPGEHGRAVVVGELRQTLMRWATPAISPPHAGPRHTIEELRQRVNQANRLRQDARFADLVVSLPALLDDLRDAAGGEADRNAVRTMAAEAMHDARAMTKKLGHLDLAWMAAELAGHAARQTDDPLLAAANAWNHIEVYKAANAPGPARALALATIDQLADTLGTATPGHLSLWGTMHLQAALIAAYWSNREDATTHLREATDAARRLGGDANHYDTMFGRTNVAIHQVAVAVELGDAKRAVDHGAKINAAGLGRERRARLAIDLARAYEHTRKHDDALASLLAAEKLAPDYVRPHPLVREIVGAQLRRARPELRSFAKRIGIM*