ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H1-18-all-fractions_k255_1150812_5

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2375..3457

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035D05BA similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 359.0
  • Bit_score: 500
  • Evalue 1.10e-138
type III secretion exporter similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 355.0
  • Bit_score: 429
  • Evalue 5.10e-118
Type III secretion exporter {ECO:0000313|EMBL:ACU36268.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 355.0
  • Bit_score: 429
  • Evalue 2.50e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
GTGAGCAAGAAGGAAGGGACCGAGAAACCAACTCCCAAGAAGCTCAAGGAGGCCAAGAGCGAAGGCCGGACCGCGCGCACTCCCGAACTGGGCGCGTGGGCGGCGATCCTGACCGCGAGCTTCCTGTTGCCCGGCATGCTCAGCAACCTGATGGACCGGACGGCCGGCCTGCTGCGCCAGTGCGGCGAGTTCATGGCGCATCCGGACCCGGCCGCGGCGCTGGGCCTGCTCGGCGATGGCATGCTCGCGGCCGCGCTGGTGGTGGCCCCACTGCTCGGCGCCATGGTCGTGGTCATCCTGGCCTCCGCGGGGTTGCAGGGCGGCCTGCGCCCGGCGCCGAAGCTGCTGAAGCCCAAGTTCTCCAGGCTCAACCCGATGCAGGGTCTCAAGCGGATAGTCGGCCCGAAATCATGGTGGGAGGCGGCCAAGACGCTGCTGAAGACCATCACGCTCGGAGCCGTGCTCTACACCGTGGTCAAGGGCCTGGTGCCGACGGTGACCGGCTCGGGCGCAATGTCGCTTCGCTCCCTGGTCGAGGTGACCGGTAGCGAGGTGCTCACGCTGATCCGCACCGCGTCGGCGGTTGGCCTGGTGCTGGCCGGCGCGGACTACGTCGTGGCCCGCAAGCGCACCTCCAAGGAGCTGAAAATGACCCACCAGGAGGTCAAGGAGGAGAACCGCAACACCGAGGGCGACCCGCACATGAAGGGTGCGATCCGGTCCAAGCAGATCGCCATGAGCCGCAACCGGATGATGTCCGACGTGCCCACCGCCGACGTGGTGCTGGCCAACCCGACCCACGTGGCGGTCGCGCTACGCTACGATCCGGCCAAGGGCGCACCCCGGGTGGTGGCCAAGGGCGCCGGTGCGGTCGCCGCCAAAATCAGGGAACTCGCCACGGAGAACCGGGTGCCCATCGTGCGGGACGTCCCACTCGCCCGCGCCCTGTACAAATCCTGCGAGCTGGGCCAGCAGATCCCGGCCGACATGTTCGGCCCCGTCGCGCACGTGCTCGCCTTCCTGCACCGCCTGCGCACCAAGGGCAGCGCCGCCGGATCTCACCAGCTTCCGAAGGCCGGCTGA
PROTEIN sequence
Length: 361
VSKKEGTEKPTPKKLKEAKSEGRTARTPELGAWAAILTASFLLPGMLSNLMDRTAGLLRQCGEFMAHPDPAAALGLLGDGMLAAALVVAPLLGAMVVVILASAGLQGGLRPAPKLLKPKFSRLNPMQGLKRIVGPKSWWEAAKTLLKTITLGAVLYTVVKGLVPTVTGSGAMSLRSLVEVTGSEVLTLIRTASAVGLVLAGADYVVARKRTSKELKMTHQEVKEENRNTEGDPHMKGAIRSKQIAMSRNRMMSDVPTADVVLANPTHVAVALRYDPAKGAPRVVAKGAGAVAAKIRELATENRVPIVRDVPLARALYKSCELGQQIPADMFGPVAHVLAFLHRLRTKGSAAGSHQLPKAG*