ggKbase home page

H1-18-all-fractions_k255_1235924_42

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(41900..42490)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Saccharomonospora marina XMU15 RepID=H5XA72_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 199.0
  • Bit_score: 339
  • Evalue 1.70e-90
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EWC61226.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 190.0
  • Bit_score: 342
  • Evalue 2.90e-91
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 197.0
  • Bit_score: 338
  • Evalue 1.10e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGGGTACGCACCCGATGCCGGCTCAGACGACCGTAGCGCCCGAGGTGAGCCCCGGCGATGCCGGCTGGACACCGCCGTCCTGGGACGAGGTGGTCCGTGAGCACGCCGACCGGGTCTACCGTCTCGCGTACCGGTTGACCGGCAACCCGCACGACGCCGAGGACCTCACCCAGGAGACCTTCATCCGGGTGTTCCGCTCGCTCGCCTCGTACCGGCCGGGCACCTTCGAGGGCTGGCTGCACCGGATCACCACCAACCTGTTCCTCGACATGGCGCGCCGGCGGTCCCGGCTGCGCATGGAGGGGCTGCCCGAGGACACCGACCGGCTGGCCGGCGACGACCCGAGCCCGGAGCAGGTCTGGTCGGAGACCCACCTCGACCCGGACCTGCAGGCCGCGCTCGACGATCTGCCCCCGGAGTTCCGGGCCGCGGTTGTGCTGTGTGACGTAGAGGGCCTGTCCTATGAGGAAATCGGCGCAACCCTTGGCGTGAAACTAGGTACTGTTCGGAGCAGGATCCACCGCGGCCGGCAGGCCTTGCGGGCGTCGCTGGAGCGGCGTAGAGAACTTGCACAGGAGGCCATGGCATGA
PROTEIN sequence
Length: 197
VGTHPMPAQTTVAPEVSPGDAGWTPPSWDEVVREHADRVYRLAYRLTGNPHDAEDLTQETFIRVFRSLASYRPGTFEGWLHRITTNLFLDMARRRSRLRMEGLPEDTDRLAGDDPSPEQVWSETHLDPDLQAALDDLPPEFRAAVVLCDVEGLSYEEIGATLGVKLGTVRSRIHRGRQALRASLERRRELAQEAMA*