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H2-16-all-fractions_k255_3810701_5

Organism: H2-16-all-fractions_metab_114

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Location: 2981..3544

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide ABC transporter, periplasmic protein LptC n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A375_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 124.0
  • Bit_score: 73
  • Evalue 2.20e-10
protein of unknown function DUF1239 similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 187.0
  • Bit_score: 132
  • Evalue 6.60e-29
Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 178.0
  • Bit_score: 164
  • Evalue 1.30e-37

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 564
GTGAGGCGCGGTACGGCCCTCGCAGCGCTCGCCCTGGCGGCCGTGCTCGGCTGCGAAGACACTGGCGCCCGCCCCACCACCATCGTCGCGGCGTCGGACAGCGCCGACCAGGTCCTGGAGGGGTTCTCACACTACGTCACTAACGAGGGCGTCCGCCGCAGCCGGGTCGAGGCGGATACGGCATATTTCTACGAGAACACGCAGATCACCGAGCTGCGCAAGGTCAAGGTCACCTTCTACGATATCAAGGGCGCTGAGAGCTCGACCCTGACGTCACGGACGGGGACCTACCGCTGGCAGGACGGTGCCATGGAGGCCGACGGCAACGTCGTGGTCGTCTCACCCGACGGTCGCCGGCTGGCCACCGAGCGGCTCCGCTACGACAATGCGACCAACACCATCAGCACCGACCAGCCGTTCACCTTTGACGACACGAGCCAGCACCTGAAGGGCAAAAGCTTCCGCTCCGACCCGGACTTCCGGAACGTGGTGACCGACCAGCCCAGTGGCGTGGCCGGCAAGGGCATACTGCTGCCGGGCCAGACCAGGGAGGACAGCCAGTGA
PROTEIN sequence
Length: 188
VRRGTALAALALAAVLGCEDTGARPTTIVAASDSADQVLEGFSHYVTNEGVRRSRVEADTAYFYENTQITELRKVKVTFYDIKGAESSTLTSRTGTYRWQDGAMEADGNVVVVSPDGRRLATERLRYDNATNTISTDQPFTFDDTSQHLKGKSFRSDPDFRNVVTDQPSGVAGKGILLPGQTREDSQ*