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H2-16-all-fractions_k255_4350885_13

Organism: H2-16-all-fractions_metab_114

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Location: comp(7840..8412)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 172
  • Evalue 2.10e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 172
  • Evalue 5.90e-41
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ41673.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 172
  • Evalue 2.90e-40

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Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCCGAACCTTCTGCCGCCGTCCGCTCCTTCGACGCCGAGGCGCTCCCGCACCTCGACGCGCTCTACCGGGTGGCCCTCCGCCTCACCGCGGACCCCACCCAGGCCGAGGACCTGGTGCAGGACACCATGCTGAAGGCGTACCGCAGCTGGCGGCAGTATCGGCCGGGGACGAATGCGAAGGGATGGCTGCTCACCATCCTACGCAACACCTTCATCAACGACTATCGGCGACGGAAGATCGAGCCCATCGCCATGGACCTCGAGGCTGTCGAGCCTCATGCGCTCTTTCGCGCCGTGGAGGAGATCGATCCCGAGGGCACCTTCTTCTCCCGGATCGTGGACGAAAAGGTCCTCGAGGCGGTCGACACCCTCCCGCCCGAGTTCCGCGAGGTGCTGGTGCTGAGCGACGTCGAAGGAATGAGCTATGCCGAGATCGCCGAAACCCTGGAGCTGCCTCTGGGTACCGTGAAATCGCGTCTGTTCCGCGCCCGCCGGCTGCTTCAGGCCAGGCTGTACGCCTATGCCGTCGAGATGGGCTACATCAAGCCCCGGGAGTCCCGCGATGGGTGA
PROTEIN sequence
Length: 191
MAEPSAAVRSFDAEALPHLDALYRVALRLTADPTQAEDLVQDTMLKAYRSWRQYRPGTNAKGWLLTILRNTFINDYRRRKIEPIAMDLEAVEPHALFRAVEEIDPEGTFFSRIVDEKVLEAVDTLPPEFREVLVLSDVEGMSYAEIAETLELPLGTVKSRLFRARRLLQARLYAYAVEMGYIKPRESRDG*