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H2-16-all-fractions_k255_7074260_2

Organism: H2-16-all-fractions_metab_114

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Location: comp(975..1724)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 7.70e-49
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 3.80e-48
tRNA pseudouridine synthase B n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW51_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 253.0
  • Bit_score: 199
  • Evalue 2.70e-48

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GGAACCCTCGATCCGTTTGCCACGGGCCTCCTCGTCGTGCTGGTGGGACGGGCGACGCGGCTGGCGCGGTTCGTGGAAGCCCAGGCGAAGACGTATCTGGCCACCACCCGGCTGGGCTTCGCCACCGACACCGACGACCACACCGGCGCGCCGCTCGGCCCGCCGGCCGACGTCTCGGGCGTGAGCGAGGCTGATGCCCGGGCGGTGCTCGCCGGCTTTCTGGGCCCGCAGCGCCAGCGGCCGCCCCGCTATTCCGCCAAGCACGTCGAGGGCGAGCGCAGTTATCGGCGGGCCCGGCGTGGGGAGGCCGTGGATCCAGCGGAGACCGACGTGACCGTCCATCGCGTCGAACTCGTGAGCTTCGCGCCGCCCGAGCTGAGCTTCCGGGTGACGGTGAGCGCCGGCACTTATGTGCGGGCGCTCGCCCGGGACCTGGGCCGGCATCTGGGTGTCGGCGCCCATCTCGCGGCGCTGCGGCGGGAGGCGATCGGCCCGCTCCGGGTGGAGGACGCCGTGCCGCTCGAGCAGCTCACCGCGGCCGCGCTGCGGCCGCCCCGCGCCGCGCTCGGACACCTGCCCGCGCTCGAGCTCGACGCGCCGTCGCGGGTCGCGGTGAGCCACGGCCGCGCGGTCCCCGCCGAGGCCGGCGCCGCCGGCGACGTCGCGCTGGTGCATGCTGGGGAGCTGGTGGCGGTGGCCCGGGTGGATGCCGGCTGGCTCCGCCCCTCCGTCGTGCTGGGGACGCCGTGA
PROTEIN sequence
Length: 250
GTLDPFATGLLVVLVGRATRLARFVEAQAKTYLATTRLGFATDTDDHTGAPLGPPADVSGVSEADARAVLAGFLGPQRQRPPRYSAKHVEGERSYRRARRGEAVDPAETDVTVHRVELVSFAPPELSFRVTVSAGTYVRALARDLGRHLGVGAHLAALRREAIGPLRVEDAVPLEQLTAAALRPPRAALGHLPALELDAPSRVAVSHGRAVPAEAGAAGDVALVHAGELVAVARVDAGWLRPSVVLGTP*