ggKbase home page
Advanced Search
Search Help

H2-16-all-fractions_metab_114

wsip-metawrap-drep-bins_Bacteria_70_1
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.60 Longest contig: 31.61 Kbp Bin length: 4.34 Mbp GC content: 69.91 %
Contigs count: 1214 Features count: 5046 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Displaying items 1101-1150 of 1214 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-16-all-fractions_k255_2859841
Species: Kitasatospora setae (50%)
2 1839 bp 72.16 0.16 100.00
H2-16-all-fractions_k255_3038190
Species: Pedosphaera parvula (100%)
1 1626 bp 68.70 0.65 100.00
H2-16-all-fractions_k255_3404107
Species: RBG_13_Deltaproteobacteria_65_10_curated (100%)
3 4152 bp 69.73 0.58 100.00
H2-16-all-fractions_k255_3419673
Species: RBG_16_Zixibacteria_48_11_curated (100%)
1 2025 bp 69.28 0.96 100.00
H2-16-all-fractions_k255_6187056
Species: R_Gemmatimonadetes_71_11 (50%)
2 1809 bp 69.04 0.17 100.00
H2-16-all-fractions_k255_6924228
Species: RBG_13_Acidobacteria_68_16_curated (50%)
2 3488 bp 67.86 0.17 100.03
H2-16-all-fractions_k255_1021996
Species: Myxococcus fulvus (50%)
2 2726 bp 70.58 0.77 100.04
H2-16-all-fractions_k255_4581464
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
4 2675 bp 71.63 0.95 100.04
H2-16-all-fractions_k255_3830896
Species: RLO_Gemmatimonadetes_68_9 (100%)
2 2612 bp 68.84 0.69 100.04
H2-16-all-fractions_k255_4979413
Domain: Bacteria (100%)
3 2423 bp 71.81 0.12 100.04
H2-16-all-fractions_k255_2414679
Order: Myxococcales (66.67%)
3 4576 bp 69.89 0.39 100.04
H2-16-all-fractions_k255_2558280
Phylum: Gemmatimonadetes (80%)
5 6768 bp 72.00 0.38 100.04
H2-16-all-fractions_k255_7912933
Species: Singulisphaera acidiphila (100%)
2 2174 bp 64.63 0.62 100.05
H2-16-all-fractions_k255_8806860
Species: RLO_Gemmatimonadetes_68_9 (100%)
2 1796 bp 75.95 0.33 100.06
H2-16-all-fractions_k255_7441947
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1715 bp 67.93 0.52 100.06
H2-16-all-fractions_k255_6018611
Species: R_Gemmatimonadetes_71_11 (50%)
2 1664 bp 68.75 1.80 100.06
H2-16-all-fractions_k255_3958172
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1577 bp 72.80 0.86 100.06
H2-16-all-fractions_k255_2186496
Species: GWC2_Gemmatimonadetes_71_10_curated (100%)
2 1547 bp 71.75 0.48 100.07
H2-16-all-fractions_k255_6952567
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1520 bp 72.70 0.20 100.07
H2-16-all-fractions_k255_4090536
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1502 bp 73.57 0.00 100.07
H2-16-all-fractions_k255_5404783
Species: RLO_Gemmatimonadetes_68_9 (100%)
2 2716 bp 74.52 0.28 100.07
H2-16-all-fractions_k255_240329
Species: GWC2_Gemmatimonadetes_71_10_curated (66.67%)
3 2590 bp 71.66 0.41 100.08
H2-16-all-fractions_k255_2738957
Phylum: Proteobacteria (66.67%)
3 2539 bp 69.59 0.47 100.08
H2-16-all-fractions_k255_7855359
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2395 bp 69.85 0.50 100.08
H2-16-all-fractions_k255_5893495
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2377 bp 68.11 0.19 100.08
H2-16-all-fractions_k255_1350911
Class: Actinobacteria (66.67%)
3 2260 bp 69.78 0.40 100.09
H2-16-all-fractions_k255_6444057
Species: Tolypothrix campylonemoides (50%)
2 2209 bp 70.98 0.75 100.09
H2-16-all-fractions_k255_5717779
Species: Nostoc punctiforme (50%)
2 2077 bp 70.25 0.29 100.10
H2-16-all-fractions_k255_4225704
Species: Gemmatimonas aurantiaca (50%)
2 2023 bp 69.01 0.30 100.10
H2-16-all-fractions_k255_5337631
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2008 bp 71.41 0.15 100.10
H2-16-all-fractions_k255_7010461
Species: Candidatus Methylomirabilis oxyfera (50%)
2 1987 bp 70.76 0.38 100.10
H2-16-all-fractions_k255_6389917
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1963 bp 69.49 0.15 100.10
H2-16-all-fractions_k255_529897
Class: Actinobacteria (66.67%)
3 1948 bp 69.92 0.31 100.10
H2-16-all-fractions_k255_8268992
Species: Sphingobium japonicum (50%)
2 1930 bp 70.21 0.16 100.10
H2-16-all-fractions_k255_5031532
Species: Stigmatella aurantiaca (50%)
2 1756 bp 71.81 0.60 100.11
H2-16-all-fractions_k255_9020100
Species: Nitrosococcus halophilus (50%)
2 2565 bp 71.62 0.47 100.12
H2-16-all-fractions_k255_3513854
Species: Gemmatimonas aurantiaca (50%)
2 1606 bp 74.91 0.28 100.13
H2-16-all-fractions_k255_3411576
Species: Myxococcus fulvus (50%)
2 1591 bp 71.09 0.38 100.13
H2-16-all-fractions_k255_3445569
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1540 bp 70.00 0.88 100.13
H2-16-all-fractions_k255_2081943
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1537 bp 67.53 0.49 100.13
H2-16-all-fractions_k255_4815186
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1531 bp 72.18 0.59 100.13
H2-16-all-fractions_k255_5268016
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1522 bp 70.57 0.49 100.13
H2-16-all-fractions_k255_4117124
Species: Chthoniobacter flavus (50%)
2 2259 bp 69.46 0.53 100.13
H2-16-all-fractions_k255_532108
Species: Gemmatimonas aurantiaca (50%)
2 2193 bp 67.94 0.62 100.14
H2-16-all-fractions_k255_4242994
Domain: Bacteria (100%)
4 2735 bp 70.05 0.77 100.15
H2-16-all-fractions_k255_4835543
Species: Gemmatimonadetes bacterium KBS708 (50%)
6 4730 bp 72.07 0.41 100.15
H2-16-all-fractions_k255_8799857
Species: Fibrisoma limi (50%)
2 2025 bp 71.41 0.59 100.15
H2-16-all-fractions_k255_2978345
Species: R_Elusimicrobia_57_9 (50%)
2 1947 bp 69.90 0.23 100.15
H2-16-all-fractions_k255_4580350
Genus: Streptomyces (100%)
3 1884 bp 69.53 0.00 100.16
H2-16-all-fractions_k255_9080336
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 4891 bp 71.66 1.26 100.16
Displaying items 1101-1150 of 1214 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.