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H2-16-all-fractions_k255_3765778_3

Organism: H2-16-all-fractions_metab_conc_41

partial RP 36 / 55 BSCG 38 / 51 MC: 4 ASCG 10 / 38 MC: 4
Location: 707..1993

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026256BE similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 404.0
  • Bit_score: 528
  • Evalue 5.70e-147
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETK30567.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 404.0
  • Bit_score: 543
  • Evalue 1.80e-151
rpoE; RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 404.0
  • Bit_score: 476
  • Evalue 5.60e-132

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
GTGACGCCGGCGCCTGACCCGGCGCGCGAGGCCCTCGTCCGGGTGGTCCGCGACGAGGGCCGGCGCGTCCTGGCCACCCTGGTCCGCACGGTCGGGGACGTGGGGCTGGCCGAGGACGCCGTCCAGGCCGCCGCCGAGCGCGCCCTCCAGGCGTGGCCCAGGGACGGCGTCCCGGACAGCCCGCGGGCCTGGCTGACGGTGACGGCCCGCCGGCGGGCCATCGACATCCTGCGCCGCGAGCGCGGCCGCGGGGCTAGGGAGGCGGCGGCGATGGAGCTGCGTGACCCGGCCGGGGACGTCCCCCCGCCCGACAGCGTCGCCCGCGACGACCTGCTGCGGCTGGTGTTCACCTGCTGCCATCCCACCCTGTCGCTGGAGGCCCAGGTGGCCCTGGCCCTGCGCACCCTGTGCGGGCTGGGCACGGCCGAGGTGGCCCGGGCCCTGCTGGTCCCCGAGCCGACCATGGTCAAGCGGCTGACCAGGGCCAAGCAGAAGATCAGGCAGGCCGCGATCCCCTACCGCATCCCGCCCGACCACGAGCTCCCCGACCGGCTGGCCGGGGTCACGGGCACCGTCTACCTGCTGTTCAACGAGGGCTACTCGGCCACCGGCGGCGACGACCCGCTCCGGGTCGACCTCGTCGACGAGGCGGTGCGGCTGGGGCGGCTGCTGGCCGGCCTGCTGCCCGACGAGCCGCCGGTGCTCGGGCTGCTCGCCCTCATGCTGCTGACCGACTCCCGCCGGCCGACCCGCCTCGACGGCGACGGCGGCCTGGTCCTGCTGGCCGACCAGGACCGGCGGCGCTGGCGCCACGAGCTGGTCCGGGAGGGGGTGGTCCTGGTCGGCCAGGGGTTGCGCCGCAGCCCCGACCGGCCCGACCCGTACGTGGTCCAGGCGGCGATCGCCGCCTGCCACGCCCTGGCCCCCGGCTACGCGGCCACCGACTGGGCCGCCATCGTGTCCTGGTACGACGTCCTGCTCACCGTGCACGACACCCCGGTGACCCGGCTGAACCGGGCCGTCGCCGTCGGCGAGCGCGACGGGCCGGCGGCCGGCCTGGCCGAGGTCGAGCGGGTCGACGGCCTGGCCGGCTACCCGCTGTGGCACGCCGCCCGGGCCGAGCTGCTGCACCGGCTCGGCCGGACCGGGCCCGCAGCCGCCGCCTACCGGTCGGCGCTGGCTCTCGGGACCAACCGGGCCCAGCGCCGCCACCTCGAGAGGCGGCTAGCCGAGGCCGCCCAGGCCGAGGTCAATCTCGAGATTTGCGATCGAGTCGACGATGCGTGA
PROTEIN sequence
Length: 429
VTPAPDPAREALVRVVRDEGRRVLATLVRTVGDVGLAEDAVQAAAERALQAWPRDGVPDSPRAWLTVTARRRAIDILRRERGRGAREAAAMELRDPAGDVPPPDSVARDDLLRLVFTCCHPTLSLEAQVALALRTLCGLGTAEVARALLVPEPTMVKRLTRAKQKIRQAAIPYRIPPDHELPDRLAGVTGTVYLLFNEGYSATGGDDPLRVDLVDEAVRLGRLLAGLLPDEPPVLGLLALMLLTDSRRPTRLDGDGGLVLLADQDRRRWRHELVREGVVLVGQGLRRSPDRPDPYVVQAAIAACHALAPGYAATDWAAIVSWYDVLLTVHDTPVTRLNRAVAVGERDGPAAGLAEVERVDGLAGYPLWHAARAELLHRLGRTGPAAAAYRSALALGTNRAQRRHLERRLAEAAQAEVNLEICDRVDDA*