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H2-16-all-fractions_k255_8179629_5

Organism: H2-16-all-fractions_metab_conc_41

partial RP 36 / 55 BSCG 38 / 51 MC: 4 ASCG 10 / 38 MC: 4
Location: comp(3087..3650)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRU3_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 3.00e-44
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 8.60e-45
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK52153.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 190.0
  • Bit_score: 185
  • Evalue 4.30e-44

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGATCGGCCCCTCGTTCGAGGCCGTGCTGGCCGCCGCCGCCGGTGGCGACGAGCTGGCCTTCGGCATCCTCTGGCGCGACCTGCAGCCTGGCCTGCTGCGCTACCTCAACGCCCTGGCCCCCGGGGCCGGCGAGGACCTGGCCTCCGAGACCTGGCTGCGGGTGGTGGGCAGGCTGGACCGCTTCGCCGGCGACGAGCGGGCGTTCCGGTCCTGGGTGTTCACCGTCGCCCGCCACCGGGCCGTCGACCGCTGGCGCCGCAGCACCCGCCGGCCCGACGAGCTCGTCTCCACCGACGCCCTGGTCCACCTGCCCGCCCCCGACGACCCTGCCTCCTCGGCCGTCGACGCCATCTCCAGCCGGGCCGCGGTGGCGCTGATCGCCACCCTCCCGCACGACCAGGCCGAGGTGGTGCTCCTGCGCGTCGTCGCCGGTCTCGAGGTCGCCGAGGTGGCCGCCATCACCGGCAAGCGCCCAGGCCACGTCCGCGTCCTGGCCCACCGCGCCCTCCGCCGCCTGGCCACCCGGCTCGGCCAGCCCGCCCACGTCCGGGGGGCGGTGTAA
PROTEIN sequence
Length: 188
MIGPSFEAVLAAAAGGDELAFGILWRDLQPGLLRYLNALAPGAGEDLASETWLRVVGRLDRFAGDERAFRSWVFTVARHRAVDRWRRSTRRPDELVSTDALVHLPAPDDPASSAVDAISSRAAVALIATLPHDQAEVVLLRVVAGLEVAEVAAITGKRPGHVRVLAHRALRRLATRLGQPAHVRGAV*