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H2-16-all-fractions_k255_8621545_1

Organism: H2-16-all-fractions_metab_conc_41

partial RP 36 / 55 BSCG 38 / 51 MC: 4 ASCG 10 / 38 MC: 4
Location: 46..585

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1S6_ACIFD similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 186.0
  • Bit_score: 128
  • Evalue 5.50e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 186.0
  • Bit_score: 128
  • Evalue 1.60e-27
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 166.0
  • Bit_score: 129
  • Evalue 4.50e-27

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGGACCTTGAAGGTTTCGAGGCGGCGACCGTTCCGCACATGAATGCGCTGTATGACGCCGCCCTGCGGCTGGCCGGCGACCACGCCACCGCCCAGGACCTGACCCAGGAGACCTATCTGCGGGCCCTGCGGTCCTTCGGCACCTTCCAGCCGGGGAGCAACTCGCGGGCCTGGCTGCTGCGCATCCAGTACAACCTGTTCTGCACCCAGTACCGCCGGGGGCGGCGCATGCCGCTGATCTGGCTGGACGAGGGCGAGGCCGACCCGTCGCTCGACCTGCCCAGCAACGAGCCCGGCCCCGAGGAGCAGACCGTCCGCGAGCTGGACCGGGAGGCGGTGCGCCAGGCCATCGCCCGCCTGCCCGAGGACTTCCGCATGGCCGTCACCCTGGTCGACATCAACGGCCTGACCTGCGCCGAGGCGGCCGCCGTCATGGACGTGCCCCGCGGCACCATCCTGTCCCGCCTCCATCGCGCCCGGCGCCGCCTGGAGGCGATCCTCATGCCCGAGCTGGGAAGGGTGCAGGCCGATGACCTGTGA
PROTEIN sequence
Length: 180
VDLEGFEAATVPHMNALYDAALRLAGDHATAQDLTQETYLRALRSFGTFQPGSNSRAWLLRIQYNLFCTQYRRGRRMPLIWLDEGEADPSLDLPSNEPGPEEQTVRELDREAVRQAIARLPEDFRMAVTLVDINGLTCAEAAAVMDVPRGTILSRLHRARRRLEAILMPELGRVQADDL*