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H2-16-all-fractions_k255_1647430

Search features with annotation key words

Displaying items 91-120 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_1647430_91
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(69828..70601)
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A09E6
ScaffoldA20, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29587.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
putative outer membrane protein
H2-16-all-fractions_k255_1647430_92
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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71170..72324
DNA (1155bp) protein (385aa)
mannose-1-phosphate guanyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B64A40
DNA, contig: SP662 {ECO:0000313|EMBL:GAN15659.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
mannose-6-phosphate isomerase
H2-16-all-fractions_k255_1647430_93
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72394..73533
DNA (1140bp) protein (380aa)
Capsular polysaccharide transport system permease n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C089_9SPHN
WcbD protein {ECO:0000313|EMBL:AHE56563.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
wcbD; capsular polysaccharide export protein
H2-16-all-fractions_k255_1647430_94
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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73533..74330
DNA (798bp) protein (266aa)
Capsular polysaccharide transport system permease protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IC52_9SPHN
capsular polysaccharide transport system permease
Capsular polysaccharide transport system permease protein {ECO:0000313|EMBL:CCA89877.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
H2-16-all-fractions_k255_1647430_95
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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74336..74992
DNA (657bp) protein (219aa)
ABC transporter related protein n=3 Tax=Burkholderia cenocepacia RepID=A0K4V2_BURCH
Capsular polysaccharide ABC transporter, ATP-binding protein kpsT {ECO:0000313|EMBL:GAO54890.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ABC transporter
H2-16-all-fractions_k255_1647430_96
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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75389..76198
DNA (810bp) protein (270aa)
UPI0003D5B99D related cluster n=1 Tax=unknown RepID=UPI0003D5B99D
Mannosyltransferase {ECO:0000313|EMBL:GAO54889.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycosyltransferase family protein
H2-16-all-fractions_k255_1647430_97
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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76509..76853
DNA (345bp) protein (115aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDJ7_SPHWW
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KKC26953.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
H2-16-all-fractions_k255_1647430_98
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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76883..77938
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphingomonas wittichii RepID=UPI00035FA9AB
H2-16-all-fractions_k255_1647430_99
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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77998..78867
DNA (870bp) protein (290aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QP30_BRESC
H2-16-all-fractions_k255_1647430_100
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78955..81018
DNA (2064bp) protein (688aa)
Methyltransferase, FkbM family n=2 Tax=Ralstonia RepID=E2T3D5_9RALS
FkbM family methyltransferase
Tax=BJP_IG2102_Porphyrobacter_62_18
H2-16-all-fractions_k255_1647430_101
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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81123..84608
DNA (3486bp) protein (1162aa)
Glycosyl transferase group 1 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E230_9GAMM
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGZ50232.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
wbdA; mannosyltransferase
H2-16-all-fractions_k255_1647430_102
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84612..85451
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25196.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
H2-16-all-fractions_k255_1647430_103
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85509..86543
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
gmd; GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase) (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNP0_9BURK
H2-16-all-fractions_k255_1647430_104
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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86592..87482
DNA (891bp) protein (297aa)
putative GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
Putative GDP-mannose 4,6-dehydratase {ECO:0000313|EMBL:CBJ51877.1}; EC=4.2.1.47 {ECO:0000313|EMBL:CBJ51877.1};; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
Putative GDP-mannose 4,6-dehydratase n=1 Tax=Ralstonia solanacearum RepID=D8NWS2_RALSL
H2-16-all-fractions_k255_1647430_105
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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87475..88587
DNA (1113bp) protein (371aa)
Elongation factor GreAB n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IYH1_9SPHN
Elongation factor GreAB {ECO:0000313|EMBL:EQB16920.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
group1 glycosyl transferase
H2-16-all-fractions_k255_1647430_106
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88702..90408
DNA (1707bp) protein (569aa)
Putative capsule polysaccharide export protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2D5_9SPHN
putative capsule polysaccharide export protein
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:AGH49926.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1647430_107
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90405..91691
DNA (1287bp) protein (429aa)
capsular polysaccharide biosynthesis protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630826
putative capsule polysaccharide export protein
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:AGH49927.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1647430_108
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91688..92713)
DNA (1026bp) protein (342aa)
glycosyl transferase family 1 n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B561
putative glycosyltransferase
Tax=BJP_IG2102_Porphyrobacter_62_18
H2-16-all-fractions_k255_1647430_109
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(92852..93877)
DNA (1026bp) protein (342aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Sphingobium sp. AP49 RepID=J2KSY7_9SPHN
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:EJK78256.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
wcbC; polysaccharide export outer membrane protein
H2-16-all-fractions_k255_1647430_110
unknown

Not on your lists

94511..94741
DNA (231bp) protein (77aa)

This feature has no annotations

H2-16-all-fractions_k255_1647430_111
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94800..95954
DNA (1155bp) protein (385aa)
aminotransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA5EA
Putative aminotransferase {ECO:0000313|EMBL:GAO37953.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
H2-16-all-fractions_k255_1647430_112
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95951..97414
DNA (1464bp) protein (488aa)
Aldehyde dehydrogenase B (EC:1.2.1.22)
Aldehyde dehydrogenase B {ECO:0000313|EMBL:CDM25670.1}; EC=1.2.1.22 {ECO:0000313|EMBL:CDM25670.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Probable aldehyde dehydrogenase n=3 Tax=Bordetella RepID=K0M872_BORPB
H2-16-all-fractions_k255_1647430_113
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97398..98303
DNA (906bp) protein (302aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HNU0_9SPHN
H2-16-all-fractions_k255_1647430_114
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(98312..99172)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000372EF5B
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Betaproteobacteria_58_11_curated
H2-16-all-fractions_k255_1647430_115
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(99169..99555)
DNA (387bp) protein (129aa)
Response regulator receiver modulated diguanylate phosphodiesterase n=1 Tax=Marichromatium purpuratum 984 RepID=F9TWG2_MARPU
response regulator receiver modulated diguanylate phosphodiesterase
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
H2-16-all-fractions_k255_1647430_116
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99691..100398
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZ88_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49050.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_1647430_117
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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100440..100988
DNA (549bp) protein (183aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=66269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii.;"
methionine sulfoxide reductase A n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4EB
basS1; two-component sensor kinase
H2-16-all-fractions_k255_1647430_118
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100985..101890)
DNA (906bp) protein (302aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
translation factor Sua5 n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AABD79
translation factor Sua5
H2-16-all-fractions_k255_1647430_119
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(101930..102286)
DNA (357bp) protein (119aa)
GntR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3FA14
GntR family transcriptional regulator {ECO:0000313|EMBL:KIY11805.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
GntR family transcriptional regulator
H2-16-all-fractions_k255_1647430_120
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(102340..102927)
DNA (588bp) protein (196aa)
Putative nitroreductase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RWS6_9SPHN
Nitroreductase {ECO:0000313|EMBL:KIY11814.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
putative nitroreductase
Displaying items 91-120 of 137 in total

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