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H2-16-all-fractions_k255_2422422

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2422422_31
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28092..29372)
DNA (1281bp) protein (427aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
5-aminolevulinate synthase (EC:2.3.1.37)
5-aminolevulinate synthase n=1 Tax=Sphingomonas melonis RepID=UPI00036007DD
H2-16-all-fractions_k255_2422422_32
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29381..30115)
DNA (735bp) protein (245aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
glutamate racemase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248937A
glutamate racemase
H2-16-all-fractions_k255_2422422_33
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30240..30845
DNA (606bp) protein (202aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B3B285
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
glycerol-3-phosphate acyltransferase
H2-16-all-fractions_k255_2422422_34
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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30842..31927
DNA (1086bp) protein (362aa)
DNA processing protein DprA n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881CCF
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ABQ70170.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_2422422_35
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31977..34442
DNA (2466bp) protein (822aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DNA topoisomerase I subunit omega (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYD0_9SPHN
H2-16-all-fractions_k255_2422422_36
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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34439..34876
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=DUT_SPHWW
H2-16-all-fractions_k255_2422422_37
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34873..35619
DNA (747bp) protein (249aa)
thiamine biosynthesis protein ThiF n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B646C3
Molybdopterin synthase sulfurylase MoeB {ECO:0000313|EMBL:GAO38170.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
molybdopterin biosynthesis protein
H2-16-all-fractions_k255_2422422_38
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35611..36246)
DNA (636bp) protein (212aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:AIT05344.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AIT05344.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AIT05344.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphopantothenate synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030E5690
H2-16-all-fractions_k255_2422422_39
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(36243..36776)
DNA (534bp) protein (178aa)
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:KKC24411.1}; EC=4.1.1.36 {ECO:0000313|EMBL:KKC24411.1};; EC=6.3.2.5 {ECO:0000313|EMBL:KKC24411.1};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenate-cysteine ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAT5_NOVAD
H2-16-all-fractions_k255_2422422_40
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36781..38313)
DNA (1533bp) protein (511aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
2-octaprenylphenol hydroxylase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66AFF
H2-16-all-fractions_k255_2422422_41
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38310..39041)
DNA (732bp) protein (244aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4C775
ubiquinone/menaquinone biosynthesis methyltransferase
H2-16-all-fractions_k255_2422422_42
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39063..39896
DNA (834bp) protein (278aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF58
H2-16-all-fractions_k255_2422422_43
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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40000..40263
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B59F02
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
H2-16-all-fractions_k255_2422422_44
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40632..42026
DNA (1395bp) protein (465aa)
chromosomal replication initiator protein DnaA n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488598
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
dnaA; chromosomal replication initiation protein
H2-16-all-fractions_k255_2422422_45
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42096..42767)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003771842
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50787.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2422422_46
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42878..43513)
DNA (636bp) protein (212aa)
Exopolysaccharide synthesis ExoD n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ40_9BURK
Exopolysaccharide synthesis ExoD {ECO:0000313|EMBL:EGJ10458.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
uncharacterized ABC-type transport system permease protein
H2-16-all-fractions_k255_2422422_47
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43520..44533)
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
tryptophanyl-tRNA ligase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000374D462
H2-16-all-fractions_k255_2422422_48
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44530..46119)
DNA (1590bp) protein (530aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E25F2C
membrane protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2422422_49
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46145..46663)
DNA (519bp) protein (173aa)
preprotein translocase subunit SecB n=1 Tax=Sphingomonas elodea RepID=UPI00026308C1
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
protein-export protein SecB
H2-16-all-fractions_k255_2422422_50
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46845..47498
DNA (654bp) protein (218aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4T8_9SPHN
import inner membrane translocase subunit Tim44
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:AGH50791.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2422422_51
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47495..48691
DNA (1197bp) protein (399aa)
MltA domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD10_SPHWW
MltA domain-containing protein
MltA domain protein {ECO:0000313|EMBL:ABQ70176.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
H2-16-all-fractions_k255_2422422_52
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48672..49208
DNA (537bp) protein (179aa)
Smr protein/MutS2 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD11_SPHWW
DNA, contig: SP633 {ECO:0000313|EMBL:GAN14213.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
DNA mismatch repair protein MutS
H2-16-all-fractions_k255_2422422_53
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49288..50973
DNA (1686bp) protein (562aa)
response regulator PleD n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885A0
response regulator PleD
Response regulator PleD {ECO:0000313|EMBL:AJP74510.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2422422_54
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50990..52564)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4RJ52_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ91348.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
type II and III secretion system protein
H2-16-all-fractions_k255_2422422_55
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52656..53867)
DNA (1212bp) protein (404aa)
peptidase S8 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A32F7
Peptidase S8 {ECO:0000313|EMBL:EWT00657.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
neutral zinc metalloprotease
H2-16-all-fractions_k255_2422422_56
unknown

Not on your lists

comp(54010..54315)
DNA (306bp) protein (102aa)

This feature has no annotations

H2-16-all-fractions_k255_2422422_57
unknown

Not on your lists

54400..54810
DNA (411bp) protein (137aa)

This feature has no annotations

H2-16-all-fractions_k255_2422422_58
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54807..55946)
DNA (1140bp) protein (380aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
succinyl-diaminopimelate desuccinylase n=1 Tax=Sphingomonas wittichii RepID=UPI00036249DE
H2-16-all-fractions_k255_2422422_59
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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56074..58146
DNA (2073bp) protein (691aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEK1_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY81881.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
H2-16-all-fractions_k255_2422422_60
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58175..58642
DNA (468bp) protein (156aa)
Cupin 2, conserved barrel n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRJ1_SPHAL
cupin
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying items 31-60 of 87 in total

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