ggKbase home page

H2-16-all-fractions_k255_2522027

Search features with annotation key words

Displaying items 31-60 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-16-all-fractions_k255_2522027_31
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30068..30592)
DNA (525bp) protein (175aa)
cytochrome C oxidase assembly protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037FC20D
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cytochrome C oxidase assembly protein
H2-16-all-fractions_k255_2522027_32
unknown

Not on your lists

comp(30601..30741)
DNA (141bp) protein (47aa)

This feature has no annotations

H2-16-all-fractions_k255_2522027_33
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30726..31622)
DNA (897bp) protein (299aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F63
H2-16-all-fractions_k255_2522027_34
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31719..32375
DNA (657bp) protein (219aa)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60830
Peptidyl-prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:EGD59931.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
H2-16-all-fractions_k255_2522027_35
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32274..32981)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VA8_RHOFD
Uncharacterized protein {ECO:0000313|EMBL:GAO36992.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
H2-16-all-fractions_k255_2522027_36
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33082..34830)
DNA (1749bp) protein (583aa)
Putative adenylate cyclase 3 {ECO:0000313|EMBL:CCE97316.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CCE97316.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036E8EAD
putative adenylate cyclase 3
H2-16-all-fractions_k255_2522027_37
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34841..35113)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RCI1_9DELT
Membrane protein {ECO:0000313|EMBL:KIC91074.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
H2-16-all-fractions_k255_2522027_38
unknown

Not on your lists

comp(35216..35545)
DNA (330bp) protein (110aa)

This feature has no annotations

H2-16-all-fractions_k255_2522027_39
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35684..37357)
DNA (1674bp) protein (558aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ABQ70221.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABQ70221.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Cytochrome c oxidase, subunit I n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD55_SPHWW
H2-16-all-fractions_k255_2522027_40
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37373..38506)
DNA (1134bp) protein (378aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
cytochrome C oxidase subunit II n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F65
cytochrome c oxidase subunit II
H2-16-all-fractions_k255_2522027_41
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38667..39254
DNA (588bp) protein (196aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
orotate phosphoribosyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9351
Orotate phosphoribosyltransferase
H2-16-all-fractions_k255_2522027_42
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39251..39991
DNA (741bp) protein (247aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S483_9SPHN
pyridoxine 5'-phosphate synthase
H2-16-all-fractions_k255_2522027_43
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39988..40395
DNA (408bp) protein (136aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUP7_9SPHN
H2-16-all-fractions_k255_2522027_44
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40396..41277
DNA (882bp) protein (294aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD50_SPHWW
H2-16-all-fractions_k255_2522027_45
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41277..42476
DNA (1200bp) protein (400aa)
permease n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893A2
Uncharacterized protein {ECO:0000313|EMBL:AHE57054.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative permease
H2-16-all-fractions_k255_2522027_46
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42367..42900)
DNA (534bp) protein (178aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TK61_9PROT
peptidylprolyl isomerase, FKBP-type
H2-16-all-fractions_k255_2522027_47
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42923..43129)
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Sphingomonas sp. S17 RepID=F3WW25_9SPHN
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
rpsU; 30S ribosomal protein S21
H2-16-all-fractions_k255_2522027_48
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43406..44071
DNA (666bp) protein (222aa)
transcriptional initiation protein Tat n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003677F75
transcriptional initiation protein Tat
Transcriptional initiation protein Tat {ECO:0000313|EMBL:AJP71735.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2522027_49
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(44125..44763)
DNA (639bp) protein (213aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHR7_KORVE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABF43583.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
H2-16-all-fractions_k255_2522027_50
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44994..45596
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9G4_MESOW
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEH87611.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
H2-16-all-fractions_k255_2522027_51
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45688..46212
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002E4AC27
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
H2-16-all-fractions_k255_2522027_52

Not on your lists

46280..47287
DNA (1008bp) protein (336aa)
Cupin-like domain n=1 Tax=uncultured organism RepID=T1WB68_9ZZZZ
Cupin-like domain {ECO:0000313|EMBL:AGU12222.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transcription factor jumonji domain-containing protein
H2-16-all-fractions_k255_2522027_53
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47291..48733)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKV9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHL24353.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
H2-16-all-fractions_k255_2522027_54
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

48893..49198
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY14573.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
H2-16-all-fractions_k255_2522027_55
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49205..49525
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SGK5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH49732.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2522027_56
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49656..49898
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489FD9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71518.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
H2-16-all-fractions_k255_2522027_57
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49903..50784)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003658651
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50654.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-16-all-fractions_k255_2522027_58
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50845..52011
DNA (1167bp) protein (389aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Sphingobium baderi LL03 RepID=T0GWY3_9SPHN
purT; phosphoribosylglycinamide formyltransferase 2
H2-16-all-fractions_k255_2522027_59
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52031..52435
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDG8_ZYMMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV90582.1}; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
H2-16-all-fractions_k255_2522027_60
unknown

Not on your lists

comp(52439..52729)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying items 31-60 of 104 in total

View Taxonomy