ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H2-16-all-fractions_k255_4212502_4

Organism: H2-16-all-fractions_metab_57

partial RP 27 / 55 MC: 3 BSCG 25 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2732..3988)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Sphingobium xenophagum RepID=UPI00035D095F similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 421.0
  • Bit_score: 415
  • Evalue 4.00e-113
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KFL46587.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 421.0
  • Bit_score: 403
  • Evalue 2.20e-109
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 419.0
  • Bit_score: 387
  • Evalue 2.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. ba1 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
CGCGACCGCCGGTCGTTCGCCGTCCTCCACCAGGTGTCGGGCGAATATCGCGGCAATTTCGGCTCGCTACGGGTCAACGTCGGCATCCGCGCGCCTTACTTCATCCGAAACCTGAAGAACTATTGCTTCACCTCGAGCGCGTCGGGCTTCGTCGAATGCTTCAATCGCGACTCCGTGCGCGAGGCGCTCGCTGCCCAGCTCAACCCGCAGGTCATCAATGCGACAACGGGTGCTGTGATCAGCGGCTGGTCACCGCCGCAGCTTCGGCGTTTCACCTACAAGAAGATCCTTCCCAACATTGGCGCGATCTATGACCTGACGGGCCAGATCAGTGCGTTCGCCAACTATTCGAAGGGTCTGTCGGTGCCGAGCACGGACAACCTTTACAACAGCTTCTTCTTCCCGATTGACCAGGCGGCGGCGAAGCCGAAGCCGGAGGTTACCGACAGCTTCGACGGCGGCCTGCGCTATCGTACGGCCAAGATCCAGGCGCAGCTGTCGGGCTGGTACACCCACTTCACCAACCGCCAGGCTTCCGCGTTCGACCCCGAGCTCAACGTGTCGGTGTTCCGGAACCTCGGCACTGTCAACAAGTGGGGCATCGACGGGTCGGTCGCCTACGAGCCGATCCGGCAGGTCACGCTCTATGCGTTCGGCTCGTGGAACAAGAGCAAGATCCAGGACAACATCCAGATCGGCCCGCTGGCTGCCGGAGTCACCTGCGATACGGTGGATCCGACCAGCCCGACGGGGCTTCAGAACTGCTCGTTCACCAAGGGCAGGCGCGAATCCGGCGCGCCGAAATATACCTACGGCGTGTCTGCTGTCGGCGACCTCGGCCCGGTGACGCTCGGTGTCGAAGCCAAGCGCACGGGCCCGCGGTTCATTTTCGACAACAACAGGCCGGTGTTCCGCGGCGACATTGCCCGCACGACGACCAGCACTCCGCAGGAACAGATCTTCGCCGCTGCCGCTCCGGCCTACTGGCTGGTCAATCTCGATGCGCGGCTGAAGCTCGCTGGGCTCGCGTCTGGGTTCAGCAAGACCTACCTGCAGTTCAACCTCTACAACGCCTTCGACAAATTCTACGTCGGCGGGTTCGGGGGCGGCCTTGCGCAGAGCACTTCGACGCGGACATGCTCGCCGACGGGAACCGCAAACTGCCCGGTCTCACCGGTCGCGACCTACGGCGCCCCGCCGTTCGTCCAGATCGGCGCGCCGCGGACCTTCTCCGCGACGCTGAACCTCGAATTCTAA
PROTEIN sequence
Length: 419
RDRRSFAVLHQVSGEYRGNFGSLRVNVGIRAPYFIRNLKNYCFTSSASGFVECFNRDSVREALAAQLNPQVINATTGAVISGWSPPQLRRFTYKKILPNIGAIYDLTGQISAFANYSKGLSVPSTDNLYNSFFFPIDQAAAKPKPEVTDSFDGGLRYRTAKIQAQLSGWYTHFTNRQASAFDPELNVSVFRNLGTVNKWGIDGSVAYEPIRQVTLYAFGSWNKSKIQDNIQIGPLAAGVTCDTVDPTSPTGLQNCSFTKGRRESGAPKYTYGVSAVGDLGPVTLGVEAKRTGPRFIFDNNRPVFRGDIARTTTSTPQEQIFAAAAPAYWLVNLDARLKLAGLASGFSKTYLQFNLYNAFDKFYVGGFGGGLAQSTSTRTCSPTGTANCPVSPVATYGAPPFVQIGAPRTFSATLNLEF*