ggKbase home page

H2-16-all-fractions_k255_2696173_13

Organism: H2-16-all-fractions_metab_63_CM_curated

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(13921..14895)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=3 Tax=Streptomyces RepID=G0PUQ0_STRGR id=5224661 bin=16ft_combo_ws3_JS1 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 164.0
  • Bit_score: 84
  • Evalue 1.30e-13
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 170.0
  • Bit_score: 79
  • Evalue 1.20e-12
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 164.0
  • Bit_score: 84
  • Evalue 1.80e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 975
GTGCCCAGCGAGATCGAGCGGCTGTATCGGGAGCACCGCGGCAGGCTAGTCCGACTCGTCGAGCGCGAGCTGCGCGACCATGACGATGCCGAGGACGTGGTGCAGACGGCGTTCCTCGATGCGCAGCGCGCCCTCGAGCACGGCACGATTCCGCGCGACCCACGCGCGTGGCTCGCCGCGATCGCCCTCAACGCCGCGCACCGTCTCCGGCGCCGACGTCTGAACGCGGAGCCGCTCGAGGATTACGCGGTACAGGAGGCGTCGGGGATGTCCGAGATTCGGGAAGCGCTCGCGAAGCTGCCGGGGAAGCAGCGGGCAGCCGTGCTGTACCGGGATGTGCTGGGCTTCTCCTACGGCGAAACGGCGGAACAGATGGGCACGTCGGTGAGCGCGGTGACGATGCTCCTGCACCGCGGCCGGCGGCGGCTTCGTCAGACGCTCGCGGTTGCGGTAGGCGGTGTCGGGTCGTGGCGGTGGCTGAGGCAGGGAGGAACGCCGCAAGTAGCGGCCGTGAAGGGCGCAGCTGCAGTCGTCGCCGCCGCCGGTCTCACGACCGGCGGGATCGTCGCGGTCGGACACACCGTTCGGGCCGTCGCTCCGGGCAGGACCGACATGCCCATCGTGTCAGTGGCCCACCGAAGCCCGAAGACGGGAGCAAAGCGGACGGCGAGCGTCGCGCTTGCGCTCGATTCGGCTCGGCGTCGCGTCAAGACGATCGACGGCTCGGGGGAGAGCGCGGCTCCCGCGTCGACGCAAGGTTCTACTGGAGATGCGGCGCCGTCGCCGCCGTGGCCCTCGACGCTCCCGGCGCCGACCGTTTCCCTGCCGACGTTGCCGATCCCCGCGTTGTCCGCGACGGTCGCGGCAACTGTCACCGTCGACACACCGATCACGCCGGTGACTGTGACCACTCCCACGGTCACGACCGTGACGGTGACGACGCCGATCGTGACAGTCACCGTGCCGATTCCGTAG
PROTEIN sequence
Length: 325
VPSEIERLYREHRGRLVRLVERELRDHDDAEDVVQTAFLDAQRALEHGTIPRDPRAWLAAIALNAAHRLRRRRLNAEPLEDYAVQEASGMSEIREALAKLPGKQRAAVLYRDVLGFSYGETAEQMGTSVSAVTMLLHRGRRRLRQTLAVAVGGVGSWRWLRQGGTPQVAAVKGAAAVVAAAGLTTGGIVAVGHTVRAVAPGRTDMPIVSVAHRSPKTGAKRTASVALALDSARRRVKTIDGSGESAAPASTQGSTGDAAPSPPWPSTLPAPTVSLPTLPIPALSATVAATVTVDTPITPVTVTTPTVTTVTVTTPIVTVTVPIP*