ggKbase home page

H2-16-all-fractions_k255_5745932_32

Organism: H2-16-all-fractions_metab_63_CM_curated

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(27390..27923)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZ39_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 176.0
  • Bit_score: 170
  • Evalue 9.60e-40
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 176.0
  • Bit_score: 170
  • Evalue 2.70e-40
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 177.0
  • Bit_score: 196
  • Evalue 3.00e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 534
ATGCAGTCCCCGGACGAGGAGACGCTCGTCGAGCGGGCGCGACGAGGCGACCCGGACGCGTTCGAGGCACTGGTGGTCTCCTACCAGTCGCTGGCCTTCCGCACGGCGTTCGTGATCGCAGGCGACGCCGCCGACGCCGAGGAGGCCGCACAGGACGCGTTCGTGAAGGCACACCGAGCACTCGGTCGCTTCCGAAGTGGTGAGCCCTTTCGGCCCTGGCTGCTGACGATCGTCGCCAATGAGGCCCGAAATCGGCGCCGCTCCCGAGGGCGACGTGCTGCGCTGGCGCTGCGAGCAGCGGATCCCGGTGCGCCGGGCGAAGATCCTGAGGCGGCCGCGCTGGCGAGCGAGCGGCGCGAGCGACTCCTGACCGCCGTGGAGCGGCTACGCGACGACGACCGCGACGTGCTCGCCTGCCGCTACTTCCTCGATCTTTCGGAGGAAGAGACCGCCGCCGCGCTCGGGATCGCCCGCGGCACCGTCAAGTCGAGAACGCACCGCGCGCTTGGGCGGCTGCAGGAGGAGTTGGCATGA
PROTEIN sequence
Length: 178
MQSPDEETLVERARRGDPDAFEALVVSYQSLAFRTAFVIAGDAADAEEAAQDAFVKAHRALGRFRSGEPFRPWLLTIVANEARNRRRSRGRRAALALRAADPGAPGEDPEAAALASERRERLLTAVERLRDDDRDVLACRYFLDLSEEETAAALGIARGTVKSRTHRALGRLQEELA*