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H2-16-all-fractions_k255_6222760_9

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: 8542..10083

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 478.0
  • Bit_score: 665
  • Evalue 3.90e-188
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 471.0
  • Bit_score: 654
  • Evalue 1.40e-185
23S rRNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C13A8 similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 443.0
  • Bit_score: 691
  • Evalue 4.70e-196

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGAGTACCGAACAACAGAAGGCCGGCGGCAAGTCCGGCCGGGGGCGTCATCGACGCGACCGCAACGCCGGCCCCGCGCCGGGCGTCTCCGACAACGAGTGGCTCAAGGTCACCGGCATCGACCTGGACGCCCAGGGCATCGCGCACAACAGCGAAGGCATCGTCGTGTTCATCGACGGCGCACTGCCGGGCGAGGAAGCGCGCGTCAAGGTGGTCAAGCGCAAGAAGCAGTGGGAGAAGGCCGACCTGGTGGCGATCCGCCGCGAGAGCTCGCAGCGCGTGGCGCCGCGTTGCCCGCACTTCGGCCTGCATCCCGGTGCCTGCGGCGGCTGCAAGATGCAGCACCTGGCGCCGTCCGCGCAGGTGGCGATGAAGCAGCGCGTGCTGGAGGACAACCTGTGGCACCTGGGCAAGGTGCGGCCCGAGCTGGTGCTGCGGCCGATCGAGGGGCCGCCGTGGGGCTATCGGCTGCGTGCGCGGCTGTCGGTGCGCTGGGTCGCCAAGAAGAACACCGTGCTGGTGGGCTTCCATGAGCGCAAGTCGAGCTACGTGGCCGACATGCGCGAGTGCCACGTCATGCCCAAGCGCATCTCGGACATGCTGATGCCGCTGCGCGCGCTGATCGAGTCCATGCAGGCGCGCGAGCGCCTGCCGCAGATCGAGGTGGCCATCGGCGACCAGGTGACCGCGCTGGTGCTGCGCAACCTCGAGCCCGTGAGCGAGCACGACATGGCGCTGCTGCGCGCATTCGGCCAGCAGCACGGCGTGCAATGGTGGCTGCAGCCCAAAGGTCCGGACACCGTCGTGCGCATCGACGACGAGGGCCCCGAGCTGGCCTACACGCTGCCCGAGTTCGGCGTTCGCATGCCGTTCAAGCCGACCGACTTCACGCAGGTCAACCACCAGATCAACACGGTGCTGGTCGGCCGCGCGTTGCGCTTGCTCGACGTCAAGAAGGACGAGACCGTCATCGACTGGTTCTGCGGCCTCGGCAACTTCACGCTGCCGCTGGCGACCATGGCCAGGACGGTGCTGGGCATCGAAGGCAGCCAGACCCTCGTGGATCGCGCGCTGGACAACGCGAAGCTCAACGGCCTGGACGCGCACACGCGCTTCGACGCCCGCAACCTGTTCGAACTGACCGCGGACGACCTCGTCGCCCTGGGCACCGTCGACAAGTGGCTGGTGGATCCGCCGCGCGAAGGCGCCTTCGCGCTCGCCAAGGCGCTGGCCGAGCTCAAGGCGTCGACGCGCGAAGGCTGGACGGCGCCCAGGCGCATCGTCTATGTCAGCTGCAACCCGGCAACGCTCGCGCGCGATACCGGACTGCTGGTGCACCAGGCCGGCTACCGCTGCGTGGCCGCCGGCGCGGTCAACATGTTCCCGCACACGGCGCACGTCGAGAGCATGGCGGTGTTCGAATGGGATCCCGACTGGAAGCCGCGCGCGGTGCCCATCGAGATTCCGGAGGCCGTCCCCGCCGCCGACGGCTTCGACGATGCCCCGGGCGCCGGGATGCCGGCCGACGACGCCGCTACTTGA
PROTEIN sequence
Length: 514
MSTEQQKAGGKSGRGRHRRDRNAGPAPGVSDNEWLKVTGIDLDAQGIAHNSEGIVVFIDGALPGEEARVKVVKRKKQWEKADLVAIRRESSQRVAPRCPHFGLHPGACGGCKMQHLAPSAQVAMKQRVLEDNLWHLGKVRPELVLRPIEGPPWGYRLRARLSVRWVAKKNTVLVGFHERKSSYVADMRECHVMPKRISDMLMPLRALIESMQARERLPQIEVAIGDQVTALVLRNLEPVSEHDMALLRAFGQQHGVQWWLQPKGPDTVVRIDDEGPELAYTLPEFGVRMPFKPTDFTQVNHQINTVLVGRALRLLDVKKDETVIDWFCGLGNFTLPLATMARTVLGIEGSQTLVDRALDNAKLNGLDAHTRFDARNLFELTADDLVALGTVDKWLVDPPREGAFALAKALAELKASTREGWTAPRRIVYVSCNPATLARDTGLLVHQAGYRCVAAGAVNMFPHTAHVESMAVFEWDPDWKPRAVPIEIPEAVPAADGFDDAPGAGMPADDAAT*