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H2-16-all-fractions_k255_8681531_5

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: 3218..4144

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y690_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 315.0
  • Bit_score: 372
  • Evalue 2.90e-100
FliA/WhiG family RNA polymerase sigma 28 subunit similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 315.0
  • Bit_score: 372
  • Evalue 8.20e-101
Putative RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:ACB33595.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 315.0
  • Bit_score: 372
  • Evalue 4.10e-100

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGATCTCCATGCAGGGTGTTCCGTCGTCACTGATCGCGCGTCATGAATCCTGGGTGCGCAAGCAGGCCAGCGCGCTGTCGCGGCGGCTGCCGGCCAATGTCGAGAAAGCCGACCTGATCCAGGCCGGGTTGATCGGCGTCGCGCAGGCGGCGATGAATTTCCAGTGGGAAGGCGATCCGGACAGCGAGGAGGGCCGCGAGGCGTTCCTGCGCTACGCCCAATTGCGCGTCAAGGGCGCCATGCTCGACGAACTGCGCCAGATGGATCAGCTGAGCCGCTCGCAGCGGCGCAAGTTCAAGGTGATCCAGATCGCGCGCGAGCGCTGGATGCAGGGCCATGACCAGCCGCCCAGCCTCAGCGAGCTGAGCCAAGTGTGCGGCATCGAGGTCAACGAGATCGCCGAGCTCGAGCAGGCCGCCTCGACGGCGCAGACGCAAAGCCTCAGCGACGAGGACGACGACGGCGACCACTACACCCCGCAGAGCCACGCGGCCACGCCCAACGACGAGGTCGAGGCCCGGGTCGACACGGCCATCCTGCTGCGCCGCCTGGAAAAGTTCTTCGCGACGCTGCCCGAGCGCGAGCGCCAGGTCATCGATGCCTACATGGGCATCGGCATGAGCACCGAGGAAGTGGCCGAATCGCTGGGCGTCAGCACATCACGCGTTTCGCAGATCTACCAGGCCACGGTCAAGCGCATCACGCTGCATTTCGCGCACAAGGACCAGCGCGCGGTCGACCGCTACCCCGCACGCTCCGGCGCCGAGTTCGAGAACCTGGTGGCCTCGCGCGAGGCCCATGCGCAATGGGGCTCGCTGCTCGAACAGGCGCTCACGGCGCCGGAAAGCCGCTTCGGCGCGCGCGGTCGCCGCAAGACCGCGTCGGCCGACGCGCCCAGCGGTGGCGAAGGCGGCGAGACCGCCTGA
PROTEIN sequence
Length: 309
MISMQGVPSSLIARHESWVRKQASALSRRLPANVEKADLIQAGLIGVAQAAMNFQWEGDPDSEEGREAFLRYAQLRVKGAMLDELRQMDQLSRSQRRKFKVIQIARERWMQGHDQPPSLSELSQVCGIEVNEIAELEQAASTAQTQSLSDEDDDGDHYTPQSHAATPNDEVEARVDTAILLRRLEKFFATLPERERQVIDAYMGIGMSTEEVAESLGVSTSRVSQIYQATVKRITLHFAHKDQRAVDRYPARSGAEFENLVASREAHAQWGSLLEQALTAPESRFGARGRRKTASADAPSGGEGGETA*