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H2-16-all-fractions_k255_1737847_6

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: 5758..6639

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 281.0
  • Bit_score: 336
  • Evalue 2.40e-89
aroE; shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 281.0
  • Bit_score: 332
  • Evalue 8.90e-89
Shikimate dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 281.0
  • Bit_score: 336
  • Evalue 1.70e-89

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
TTGAGCAGTGCACCGTCCGTCCGCCTTGCCGTCATCGGCAACCCGGTCGCCCACAGCCGTTCGCCGCAGATCCACGCCCGCTTCGCTTCGGCCTCGAACCACGTGGTGGACTACGGGCGCATCGAGGCGCCGGTCGACGGCTTCGTGGCCACCCTGCGCGCTTTCGCCGACGCCGGCGCGCGCGGCTGCAACGTCACGGTGCCGTTCAAAGGCGAGGCCTTCGCCGCCTGCGCGCGGCTGAGCGAACGCGCGCGCCGCGCGCAGGCCGTCAACACCATCGCATTCGAGGCCGACGGCTGGTTCGGCGACAACACCGACGGTGTCGGGCTGGTGCGCGACATCGAGCTCAACGCCGGCGTGCCCCTGCACGGCCGGCGCGTGCTTCTGCTGGGCGCCGGTGGCGCGGCGGCCGGCGCGCTCGACCCGCTGCTGGCCGCAAGACCGGCCACGCTGGTCGTCGCCAACCGCACGCCCGCGAAAGCGCAGGCCTTGATCGAACGCTTCGCGGCCAGCGCGGCGCGTCTGGATGTGCCGCTGTCGGCCGCGTCGCTGGAGACGCCCGGTGCCGGCTTCGACGTGTTGATCAACGGCACCGCCGCGAGCCTGCACGCCGCCGTTCCGCCGCTGCCCACCGGCACGCTGCGCCCCGGCGCACTGGCGCTCGACATGATGTACGGTGCCGCCGCCCTGCCCTTCCTGCGCTGGGCCCGCGCGCAGGGCGCGGTGGCGCGCGACGGCCTGGGCATGCTGGTGGAGCAGGCGGCCGAGGCCTACTTCGTGTGGATGGGCGTGCGCCCGGAGACCTTCCAGGTGCTCACCGAGCTGCGACGCGAGGTCGACGCGCAGGCCGCCGCGGCGGCCAAGGCGGGAGCCTCGGCTTGA
PROTEIN sequence
Length: 294
LSSAPSVRLAVIGNPVAHSRSPQIHARFASASNHVVDYGRIEAPVDGFVATLRAFADAGARGCNVTVPFKGEAFAACARLSERARRAQAVNTIAFEADGWFGDNTDGVGLVRDIELNAGVPLHGRRVLLLGAGGAAAGALDPLLAARPATLVVANRTPAKAQALIERFAASAARLDVPLSAASLETPGAGFDVLINGTAASLHAAVPPLPTGTLRPGALALDMMYGAAALPFLRWARAQGAVARDGLGMLVEQAAEAYFVWMGVRPETFQVLTELRREVDAQAAAAAKAGASA*