ggKbase home page

H2-16-all-fractions_k255_1850086_17

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: 20733..21302

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT10_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 189.0
  • Bit_score: 299
  • Evalue 1.50e-78
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 189.0
  • Bit_score: 299
  • Evalue 4.10e-79
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:BAL96147.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 189.0
  • Bit_score: 299
  • Evalue 2.10e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
TTGGCCACCGACAAAGAACTTTCAGACTTCCTCAAGAGCGTCGAGAAACGCGCGTTCAAGCGCACGGCCTTCGCCGTGCGCGACGACGACTCCGCGCTGGACATCGTGCAGGATTCGATGATTCGCCTGGCCGAGAAGTACGTCGACCGGCCGGCGGCCGAGTTGCCACTGCTGTTCCAGCGCATCCTGTCCAACGCGACCATGGACTGGTTCCGGCGCCAGAAGGTGCGCAATGCCGTCGTCCACAACTTCTCGGACTTCGGCGGCGGGAGCGACGAGGACGGAGAATTCGACATCCTGGAGATGCTCGATGGCATCGAAGGGAACGTTGGCACCGAAAGTGCATCAGATTCCGTATCGCGGGATCAAATCCTTCAACTGATTGAAGAACAGGTCGGAGAGCTTCCCGCGCGTCAACGCGAAGCCTTCCTGCTGCGTTACTGGGAGGAATTGGACGTTGCAGAGACCGCATCCGTGATGGGATGCTCGGAAGGTAGCGTCAAGACGCATTGCTCACGCGCTGTTCACGCGCTGGCCAAGGCGTTGAAAGCCAAGGGACTCGCACCATGA
PROTEIN sequence
Length: 190
LATDKELSDFLKSVEKRAFKRTAFAVRDDDSALDIVQDSMIRLAEKYVDRPAAELPLLFQRILSNATMDWFRRQKVRNAVVHNFSDFGGGSDEDGEFDILEMLDGIEGNVGTESASDSVSRDQILQLIEEQVGELPARQREAFLLRYWEELDVAETASVMGCSEGSVKTHCSRAVHALAKALKAKGLAP*