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H2-16-all-fractions_k255_2553751_8

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: comp(6411..7052)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 213.0
  • Bit_score: 387
  • Evalue 1.10e-104
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RPOA_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 213.0
  • Bit_score: 387
  • Evalue 7.90e-105
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 213.0
  • Bit_score: 387
  • Evalue 2.20e-105

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
CATGACGTCGAGATCGTCAACCCCGACCATATCGTGGCCCACCTGGCCCAGGGCGGCAAGCTGGACATGCAGATCAAGGTCGAGAAGGGCCGTGGCTACGTTCCCGGCAACATGCGCCGCTTTGGCGACGAGACGACCAAGGCCATCGGCCGCATCGTCCTGGACGCCTCGTTCGCGCCGGTTCGCCGCGTCAGCTACGCCGTCGAGAACGCCCGCGTCGAGCAGCGTACCGACCTGGACAAGCTGGTGATGGAGATCGAGACCAACGGCGCCATCTCGCCCGAGGAAGCGATCCGTTCGTCGGCCAAGATCCTGGTCGAACAGCTGGCCGTGTTCGCGCAGCTCGAAGGCAGCGACATCGCCGCGTTCGACCAGCCGGCCCCGCGCACGGCCCAGTTCGACCCGATCCTGCTGCGTCCGGTCGACGAGCTCGAACTGACGGTGCGTTCGGCCAACTGCCTGAAGGCCGAGAACATCTACTACATCGGCGACCTGATCCAGCGTACCGAGACCGAGCTGCTCAAGACCCCGAACCTGGGTCGCAAGTCGCTCAACGAAATCAAGGAAGTCCTGGCTTCGCGCGGCCTCACGCTGGGCGCGCGTCTCGAGAACTGGCCTCCGCAAGGTCTGGACAAGCGTTAA
PROTEIN sequence
Length: 214
HDVEIVNPDHIVAHLAQGGKLDMQIKVEKGRGYVPGNMRRFGDETTKAIGRIVLDASFAPVRRVSYAVENARVEQRTDLDKLVMEIETNGAISPEEAIRSSAKILVEQLAVFAQLEGSDIAAFDQPAPRTAQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIKEVLASRGLTLGARLENWPPQGLDKR*