ggKbase home page
Advanced Search
Search Help

H2-16-all-fractions_metab_conc_71

wsip-metawrap-drep-bins_Burkholderiales_69_3
In projects: wsip-metawrap-drep-bins  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 2.95 Longest contig: 43.47 Kbp Bin length: 5.39 Mbp GC content: 69.20 %
Contigs count: 528 Features count: 5208 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Displaying items 151-200 of 528 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
H2-16-all-fractions_k255_8148537
Order: Burkholderiales (83.33%)
12 10844 bp 68.91 2.41 93.73
H2-16-all-fractions_k255_4024255
Order: Burkholderiales (100%)
12 11231 bp 68.36 3.19 95.57
H2-16-all-fractions_k255_8455337
Order: Burkholderiales (91.67%)
12 9934 bp 68.80 2.75 83.98
H2-16-all-fractions_k255_8753869
Order: Burkholderiales (100%)
12 13051 bp 69.55 3.08 93.21
H2-16-all-fractions_k255_8960869
Order: Burkholderiales (58.33%)
12 15219 bp 69.90 3.34 90.40
H2-16-all-fractions_k255_265124
Order: Burkholderiales (100%)
12 10148 bp 69.49 2.17 85.41
H2-16-all-fractions_k255_5009755
Order: Burkholderiales (83.33%)
12 11361 bp 70.06 2.63 84.82
H2-16-all-fractions_k255_407850
Genus: Rubrivivax (50%)
12 15606 bp 69.81 3.28 90.83
H2-16-all-fractions_k255_419013
Order: Burkholderiales (50%)
12 12148 bp 67.35 1.77 88.71
H2-16-all-fractions_k255_5197873
Order: Burkholderiales (91.67%)
12 12111 bp 67.18 3.06 88.13
H2-16-all-fractions_k255_5755828
Phylum: Proteobacteria (66.67%)
12 10199 bp 69.42 3.18 91.21
H2-16-all-fractions_k255_1775903
Order: Burkholderiales (83.33%)
12 13519 bp 69.07 2.71 95.11
H2-16-all-fractions_k255_2056288
Order: Burkholderiales (58.33%)
12 11359 bp 69.42 3.12 95.82
H2-16-all-fractions_k255_2663610
Order: Burkholderiales (81.82%)
11 15040 bp 69.22 4.16 93.53
H2-16-all-fractions_k255_7192883
Order: Burkholderiales (54.55%)
11 10485 bp 70.95 2.72 91.19
H2-16-all-fractions_k255_3083139
Order: Burkholderiales (72.73%)
11 10450 bp 68.90 2.53 90.98
H2-16-all-fractions_k255_3344874
Order: Burkholderiales (63.64%)
11 10202 bp 67.46 2.69 96.72
H2-16-all-fractions_k255_7553440
Order: Burkholderiales (54.55%)
11 12017 bp 70.12 3.01 89.42
H2-16-all-fractions_k255_3697214
Order: Burkholderiales (54.55%)
11 9926 bp 67.75 3.58 93.30
H2-16-all-fractions_k255_8304374
Order: Burkholderiales (90.91%)
11 9519 bp 71.99 2.99 90.89
H2-16-all-fractions_k255_4123927
Order: Burkholderiales (90.91%)
11 12382 bp 67.61 4.30 92.00
H2-16-all-fractions_k255_4178981
Phylum: Proteobacteria (90.91%)
11 12173 bp 68.57 2.18 93.72
H2-16-all-fractions_k255_4211834
Order: Burkholderiales (54.55%)
11 12449 bp 70.20 1.64 85.86
H2-16-all-fractions_k255_4615451
Order: Burkholderiales (81.82%)
11 15463 bp 69.72 3.30 93.77
H2-16-all-fractions_k255_9020540
Order: Burkholderiales (72.73%)
11 13267 bp 70.11 3.31 88.87
H2-16-all-fractions_k255_9050516
Order: Burkholderiales (72.73%)
11 20779 bp 68.75 2.83 95.19
H2-16-all-fractions_k255_9104395
Order: Burkholderiales (81.82%)
11 15149 bp 71.14 3.07 88.46
H2-16-all-fractions_k255_269756
Order: Burkholderiales (54.55%)
11 15736 bp 69.65 3.73 89.97
H2-16-all-fractions_k255_4927648
Order: Burkholderiales (90.91%)
11 14775 bp 67.19 3.03 95.37
H2-16-all-fractions_k255_5530266
Order: Burkholderiales (72.73%)
11 10943 bp 69.37 3.70 90.44
H2-16-all-fractions_k255_5550167
Order: Burkholderiales (90.91%)
11 7334 bp 69.51 2.86 83.69
H2-16-all-fractions_k255_5634307
Order: Burkholderiales (63.64%)
11 10156 bp 69.86 2.45 89.95
H2-16-all-fractions_k255_1657539
Class: Betaproteobacteria (63.64%)
11 10623 bp 68.33 3.19 96.05
H2-16-all-fractions_k255_1706774
Order: Burkholderiales (72.73%)
11 13527 bp 69.87 2.81 95.43
H2-16-all-fractions_k255_5927991
Order: Burkholderiales (81.82%)
11 12197 bp 69.43 3.21 95.26
H2-16-all-fractions_k255_2245049
Phylum: Proteobacteria (80%)
10 9957 bp 69.58 2.67 92.20
H2-16-all-fractions_k255_2270221
Order: Burkholderiales (80%)
10 8361 bp 69.17 2.80 96.66
H2-16-all-fractions_k255_6224751
Order: Burkholderiales (70%)
10 13452 bp 67.21 1.93 85.62
H2-16-all-fractions_k255_6829869
Order: Burkholderiales (70%)
10 10379 bp 70.73 2.99 92.23
H2-16-all-fractions_k255_6981328
Order: Burkholderiales (60%)
10 11177 bp 69.95 2.54 93.19
H2-16-all-fractions_k255_7400240
Order: Burkholderiales (90%)
10 7467 bp 68.43 2.55 94.70
H2-16-all-fractions_k255_3346253
Order: Burkholderiales (50%)
10 13128 bp 68.53 2.54 91.57
H2-16-all-fractions_k255_7733037
Order: Burkholderiales (100%)
10 9752 bp 70.14 3.49 92.50
H2-16-all-fractions_k255_7872265
Class: Betaproteobacteria (50%)
10 7466 bp 70.43 2.39 90.61
H2-16-all-fractions_k255_7914249
Order: Burkholderiales (100%)
10 8519 bp 69.05 1.81 88.67
H2-16-all-fractions_k255_7940653
Species: R_Burkholderiales_69_20 (50%)
10 15072 bp 67.54 2.81 92.68
H2-16-all-fractions_k255_8023964
Order: Burkholderiales (60%)
10 10710 bp 68.38 2.51 94.09
H2-16-all-fractions_k255_4427898
Order: Burkholderiales (90%)
10 8580 bp 68.37 1.92 97.41
H2-16-all-fractions_k255_8596039
Order: Burkholderiales (70%)
10 6269 bp 70.36 2.42 90.45
H2-16-all-fractions_k255_4683503
Order: Burkholderiales (60%)
10 11776 bp 69.42 2.28 87.94
Displaying items 151-200 of 528 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.