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H2-18-all-fractions_k255_583848_7

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(9002..9553)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase primary sigma factor n=1 Tax=uncultured prokaryote RepID=H5S8U0_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 168.0
  • Bit_score: 143
  • Evalue 1.70e-31
RNA polymerase sigma factor RpoD (Sigma-A) (Sigma-43) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 168.0
  • Bit_score: 141
  • Evalue 1.40e-31
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 176.0
  • Bit_score: 205
  • Evalue 3.90e-50

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
TGGATTCGCCAGGCCTGCCAGCGTGCCGTCTCGAACCAGTCCGCGACGATCCGCGTCCCGACGCACGTCCACGAGCGGCGCGTGAAGCTCAACCGGGCGCGCCAGCGGCTCCAGGCCGCGACCGGCGACGAGCCGACGCGGGAGGATCTCGCGAAGGCGACGGGCCTCGAGCTGCGCTACGTCGAGGAGGCGCTCGGCGCGGTCGAGGCGTCCGTCTCGCTGAACCAGGCTGTCGGCTCCGACGGCGAGGGCGAGCTCGGCGACCTGTTCGCCGACCCGAACTCGCTCGATCCGGAGGACGAGGCTGCCGAGGCGCTGCGTGCACGCTCGGTGCGTGACGCGGTGCGTCGCCTGCCGGAGCGCGAGCGCCGTGTGCTCGAGCTTCGCTTCGGCTTCGACGGCGAGCCGACCTCGCTGGAGCAGATCGGCCGCGAGCTGAAGATCAGCCGCGAGCGGGTGCGCCAGGTCGAGCGCGACGCGCTCGCCGCGCTGGAGCACCAGCTGGCCGACGTCGTCGCCATCTCAGGCGACGACCTGGTCCACGCGGCCTAA
PROTEIN sequence
Length: 184
WIRQACQRAVSNQSATIRVPTHVHERRVKLNRARQRLQAATGDEPTREDLAKATGLELRYVEEALGAVEASVSLNQAVGSDGEGELGDLFADPNSLDPEDEAAEALRARSVRDAVRRLPERERRVLELRFGFDGEPTSLEQIGRELKISRERVRQVERDALAALEHQLADVVAISGDDLVHAA*