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H2-18-all-fractions_k255_4527635_5

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(2042..2650)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 174.0
  • Bit_score: 159
  • Evalue 2.50e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 169.0
  • Bit_score: 157
  • Evalue 3.60e-36
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 190.0
  • Bit_score: 274
  • Evalue 7.60e-71

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGGCGGTGCTACCGTGGCCGAGATGGCCGAGGCTCCACCCGATGCCACCCGGATCGCCGCCGAGGCGCGCGATCGTGTGCGCTTCGAGGAGGAGGCGCTCGCGCTCAGCGACCAGGTGTTTCGAGTTGCGCGTCACCTTGCCGGGTCGCGCGAGGAAGCGGAGGATCTCGTGCAGGAGACGTACGCTCGTGCGTTCCGGAGCTGGCGCTCGTTCCAGCCGGGCACCAACCTTCGCGCGTGGCTGCTGCGCATCCTGACCAACCTCAACATCGACCGCGGCCGTCGCAAGCAGCGCGCGCCTCAGACGACGCCGCTCGAGGCGAACGACTATTACCTCTACGACAAGCTCGCCGAGGCCAACGGCGCCGCAACCGACGAGGAGCGCGTCGTCGAGCGATTGTCGCAGGACGACATCGTCTCGGCACTCGCCGCCGTGCCGCACGACTTCCGCGACGTGATCGTTCTCGTGGACATCGGCGACTTCAGCTATCAGGATGCGGCGAACATCCTCGACATTCCGATTGGAACCGTGATGTCCCGGCTGCATCGCGGACGCCGCATCCTCAAACGCGAGCTGGCTGACTCGGTTCTGGAGGACGTGTCATGA
PROTEIN sequence
Length: 203
MGGATVAEMAEAPPDATRIAAEARDRVRFEEEALALSDQVFRVARHLAGSREEAEDLVQETYARAFRSWRSFQPGTNLRAWLLRILTNLNIDRGRRKQRAPQTTPLEANDYYLYDKLAEANGAATDEERVVERLSQDDIVSALAAVPHDFRDVIVLVDIGDFSYQDAANILDIPIGTVMSRLHRGRRILKRELADSVLEDVS*