ggKbase home page

H2-18-all-fractions_k255_5911580_4

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(2153..2731)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z6U0_DEHE1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 175.0
  • Bit_score: 153
  • Evalue 1.70e-34
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 175.0
  • Bit_score: 153
  • Evalue 4.90e-35
RNA polymerase sigma70 {ECO:0000313|EMBL:AII59893.1}; TaxID=1432060 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 175.0
  • Bit_score: 153
  • Evalue 2.40e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dehalococcoides mccartyi → Dehalococcoides → Dehalococcoidales → Dehalococcoidia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 579
GTGAGCTCTGGAGCGACCGAGAAGCCCGCGCGGGAGTCGACGGACCACATCCGCAAGCTCGTCGAGCGGGCCCAGAAGGGCGATCGCAGCGCGCTCGAAGAGCTGTACCTGATCCATTTCGACCGGATCTACAGCTACCTGCACGTGAGCGTGGGCAATCGGCACGACGCGGAGGACCTTACGACGCAAACGTTCCTCAAGATGCTCGAGTCGATCGGGCGCTTCCGCTGGCAGTCGGCTCCGTTTTCAGCCTGGCTCTTCCGCATCGCGCACAACCTCGCCATGGATCACTTCCGCGCGCGCAAGCGCGTACAGCCGGAGGAGGAGGTTCCGGAGCCGCTCGGCTCCGAGGAGCCCTCGGCCGAGCTCGAGGCGATGCAGTCGATCGGGCGCCAGTCGATGCTGGAGTTGATCGACAAGCTCTCGCCCGAGCAGCAGCAGGTCTTGACCCTGAAGTTCGTCTTCAACTTCCCGAACGCCGACGTGGCGAAGATCCTCGACAAGACCGAGGGCGCGATCAAGTCGCTGCAGCATCGCGCACTCGCGTCGCTCCAGAAGCAGCTCGCACAGAAAGACTGA
PROTEIN sequence
Length: 193
VSSGATEKPARESTDHIRKLVERAQKGDRSALEELYLIHFDRIYSYLHVSVGNRHDAEDLTTQTFLKMLESIGRFRWQSAPFSAWLFRIAHNLAMDHFRARKRVQPEEEVPEPLGSEEPSAELEAMQSIGRQSMLELIDKLSPEQQQVLTLKFVFNFPNADVAKILDKTEGAIKSLQHRALASLQKQLAQKD*