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H2-18-all-fractions_k255_2033600_2

Organism: H2-18-all-fractions_metab_36

partial RP 29 / 55 MC: 3 BSCG 29 / 51 MC: 4 ASCG 10 / 38 MC: 3
Location: 471..1064

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=3 Tax=Amycolatopsis mediterranei RepID=D8HIE6_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 163.0
  • Bit_score: 184
  • Evalue 9.30e-44
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 163.0
  • Bit_score: 184
  • Evalue 2.60e-44
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK46863.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 163.0
  • Bit_score: 184
  • Evalue 1.30e-43

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGTCCGCGGTGGTCTGGGCGGAGGGAGCCGGGATCATGCTGGTCGCGCTCGGTACGGGAGAGGCGGTGTCGGTGGACCAGTCGGTCGCGGTGGGAGCGGAGTGGGACGACGCCCTGGTCGACCTCTACCGGGCCCAGCGTCTGCCGCTGTTGCGCCTCGCGGTGCTGCTCACCGACGACCCCGGCACGGCCGAGGACGTCGTCCAGGACGCGTTCCTCGCCCTGCAGCGCCGGTGGCACGCGGTCGACCCGGCAGCGGCGGCCGGCTACCTGCGGACGTCGGTCGTCAACGGGGTCCGCACCCTCTACCGGCGCCGCAGCGTGGCGCGTCGTCACCTGCACGCGGTGGGTCAGGAGGACCTGCCACCGGCCGATCTGGCCCTCCTGCTCACCGAGGATCAGCGGGAGGTCGTCGAGGCGCTCCGCACGCTGCCCCGGCGGCAACGGGAGGTGCTCGTGCTGCGCTACTGGTCGGAGCTCAGCGAGGCCGAGATCGCCGACGCTCTCGGGGTCGCGCGCGGCACCGTGAAGTCCAGCGCCTCGCGGGGACTGGCGTCCCTGCAGAAGCACCTGGGAGATCGCCATGTCCGATGA
PROTEIN sequence
Length: 198
VSAVVWAEGAGIMLVALGTGEAVSVDQSVAVGAEWDDALVDLYRAQRLPLLRLAVLLTDDPGTAEDVVQDAFLALQRRWHAVDPAAAAGYLRTSVVNGVRTLYRRRSVARRHLHAVGQEDLPPADLALLLTEDQREVVEALRTLPRRQREVLVLRYWSELSEAEIADALGVARGTVKSSASRGLASLQKHLGDRHVR*