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H2-18-all-fractions_k255_2879383_15

Organism: H2-18-all-fractions_metab_36

partial RP 29 / 55 MC: 3 BSCG 29 / 51 MC: 4 ASCG 10 / 38 MC: 3
Location: 12256..12648

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SF99_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 132.0
  • Bit_score: 237
  • Evalue 6.20e-60
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 132.0
  • Bit_score: 237
  • Evalue 1.80e-60
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 132.0
  • Bit_score: 237
  • Evalue 8.70e-60

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GTGCCTGAGCAGTCCGTGGACGAGACGCCCGAAACCAGCGCTGTACATCCCGTCATCGGTGCGCCGGTGGACGTTCCGGAAGCGCGTGAGGGCGGCAGCCGAACGGAGGTCGCCGAGACGCGCGCGGAGCGGGATGCCCGCTTCGAGCGGGACGCGCTGCCCTTCCTCGACCAGCTCTACCCGGCGGCGCTGCGGATGACCCGCAACCCGGCCGACGCCGAGGACCTCGTCCAGGAGACGTTCGTGAAGGCCTACTCCGCCTTCCACCAGTTCGCCGAGGGCACCAACCTGAAGGCGTGGCTGTACCGGATCCTGACGAACACCTACATCAACAGCTACCGCAAGAAGCAGCGGCAGCCGCAGCAGTACCCCACCGACCAGGTGCAGGACTGG
PROTEIN sequence
Length: 131
VPEQSVDETPETSAVHPVIGAPVDVPEAREGGSRTEVAETRAERDARFERDALPFLDQLYPAALRMTRNPADAEDLVQETFVKAYSAFHQFAEGTNLKAWLYRILTNTYINSYRKKQRQPQQYPTDQVQDW