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H2-18-all-fractions_k255_4590604_6

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: comp(3181..3858)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 182.0
  • Bit_score: 195
  • Evalue 4.60e-47
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 182.0
  • Bit_score: 195
  • Evalue 6.50e-47
putative RNA polymerase sigma factor, sigma-24-like protein similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 206.0
  • Bit_score: 132
  • Evalue 1.40e-28

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 678
ATGAGGCCATCCAAAGTAATTGCTTCCACGCGCCGCAAGCCAGAGAAACGGGTGCGCCTGTCAAAATCGCGAGCGCAGGCGCGCACGGTTGTCCCCCAGCTCGAGCCTGGAGCGCCAAGTGACTTCGACTTGATGAAAGGGATCCAGACCGGCGACGCAGACGCGCTCTCTCAGCTCTACGATCGATATAATGGGATTTTGAAGGCACTTATCCTGAGAGTGATTCATAACGAAGCCGAGGCCGATGATCTCTTACAAGAGATTTTCATGGAGATCTGGAATCAGGCGAAGAATTTTTCCGCGCAGAAAGGGAAACCGCTTGGATGGATGGTTACCTTGGCCCGGCGCCGCGCGATCGATGGTCTACGCAAGAAGCAGGCTTATGCGCGTGCCGAGGAACGCCTGCAAAACGAAACTGAACAGCAGCCTGATGCGTGGGTTCATAACGCAACTGAAGCAGAAATCGTCCTGAGCGACACGCGCGCTCTCATTCGCAAAGTCATCGCCGGCCTGCCACCACCCCAGCAGCAGGCAATCGACCTCGCATTTTTTAAAGGTATGAGCCAGCGCGAAATCGCCGCGAAAACGAATACACCCTTAGGCACGGTAAAAACAAGGCTTGAACTTGGGCTCAAAAAAATTTATGACGGTCTCAAGGAGTTGAAGGATGAACTTTAG
PROTEIN sequence
Length: 226
MRPSKVIASTRRKPEKRVRLSKSRAQARTVVPQLEPGAPSDFDLMKGIQTGDADALSQLYDRYNGILKALILRVIHNEAEADDLLQEIFMEIWNQAKNFSAQKGKPLGWMVTLARRRAIDGLRKKQAYARAEERLQNETEQQPDAWVHNATEAEIVLSDTRALIRKVIAGLPPPQQQAIDLAFFKGMSQREIAAKTNTPLGTVKTRLELGLKKIYDGLKELKDEL*