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H2-18-all-fractions_k255_5197087_8

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: comp(5455..5889)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU29_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 149.0
  • Bit_score: 131
  • Evalue 6.90e-28
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 145.0
  • Bit_score: 124
  • Evalue 1.40e-26
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 147.0
  • Bit_score: 131
  • Evalue 5.60e-28

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 435
GGGTTGCTGCTCTTCGCCCGGCAATGGGTGCAGTCGGCCGCCGACGCAGAAGACATTGTGCAGGAAGCTTTCGTCAAGTTTTGGCGGCGCAACCACAAGATCGAGAACCGTGCGCCCCTTTACACTGCCGTGCGTTCCATTGCTCTCGATTTCATCCGTCGCGATAGCCGCCGCGCCCGACGCGAGGCCAGCGCGATTAGCGAAACTGATGAATTTATCGAGCCACAGTTTGAATTTGAGGATGACACGCAGCGAGCTCTCGCTGAAGCAATCGACGTTCTGCCCTGCGAACAACGCGAGGTGGTCGTCATGAAAATTTGGAACGAATTAACCTTCGCCGAGATTGCGGGCGTCCTCGGCGTTTCGCAAAACACCGCGGCGTCACGTTACCGGTACGCGCTGGCCGCGTTGAGAAACACGCTACAACCCAGATGA
PROTEIN sequence
Length: 145
GLLLFARQWVQSAADAEDIVQEAFVKFWRRNHKIENRAPLYTAVRSIALDFIRRDSRRARREASAISETDEFIEPQFEFEDDTQRALAEAIDVLPCEQREVVVMKIWNELTFAEIAGVLGVSQNTAASRYRYALAALRNTLQPR*