ggKbase home page

H2-18-all-fractions_k255_5777939_2

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: 590..1192

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 202.0
  • Bit_score: 212
  • Evalue 2.50e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 202.0
  • Bit_score: 212
  • Evalue 3.50e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 174
  • Evalue 1.60e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 603
ATGCCTGGCAACGATCGAGGAAACCGAGCAAAATCGGAAGAAGACGCTGACGACTTGCGGCTCATGCAGCTGGTCGGTAGAGGCGATACCGGCGCATTCGAGCAGCTCATCGAAAAACATCAAGCTCTAGTGGCGGGGACAGTGGCGCGCATGCTGGGCAGTAACTCGGACGTAGAAGACATCGCGCAGCAGGTCTTTATCCGACTTTGGAAAAGCGCGCGCCGATACGTCCCCCGCGCAAAGTTCACCACGTGGCTGCTGAAAATTACGCGCAACCTGGTTTTTAACGAGATGCGCCGTACGAAGCGACGCGCGCATGTTCCGCTTCAGTCGGAACCGGGCGCAGAGGATCCCCCTGTGAAGGATGAGATGAATCTCGCGCCGGATGCGTCGCTTTTGGAGACGGAACTTCAGCGAACGATTGAAGAAGCGATTCTGCAGCTGCCGGAGACCCAACGCATGGCGCTGGTGCTGCGGAGGTATGAACAGCTTAGTTATGAGCAAATTGCCGAGGTCCTCGATCTCTCCGTTCCCGCTGTAAAAAGCGTGCTCTTTCGCGCGCGATCCGAACTCCGCTCCAAGCTGAGTAAGTATCTTACCTGA
PROTEIN sequence
Length: 201
MPGNDRGNRAKSEEDADDLRLMQLVGRGDTGAFEQLIEKHQALVAGTVARMLGSNSDVEDIAQQVFIRLWKSARRYVPRAKFTTWLLKITRNLVFNEMRRTKRRAHVPLQSEPGAEDPPVKDEMNLAPDASLLETELQRTIEEAILQLPETQRMALVLRRYEQLSYEQIAEVLDLSVPAVKSVLFRARSELRSKLSKYLT*