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H2-18-all-fractions_k255_2050594_2

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: comp(741..1355)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B42BA4 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 179.0
  • Bit_score: 158
  • Evalue 5.70e-36
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM66561.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 5.10e-51
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 190.0
  • Bit_score: 157
  • Evalue 2.70e-36

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGATGCAGACAGCAAGCTGTGAGCTTCCACGACTCCAGACCTTTTTCATAGGCGTAGCGTCCGAAAGTCCGGAAGATTCGGATTACGCGTTGGCGCGGGCGGCAGCCGGTGGGGCCATCGCGGCCATCGGTGACCTGTATGAGCGCCACAACCGTCTAGTTTACTCGCTGTGTCTGCGCATGACGCGCAGCAGGCCGGAGGCTGAGGACTTGACGCAGGAGGTTTTTATTCACCTCATCCGAACGATAGGCACTTTCCGCGGCGAGAGCCAGTTTACAAGCTGGCTCTATCGTCTCACTGTTAACCGTGTGTCGATGCATTTCCGTCACCTGTCCAGACGCAAGGAGACGGAAGTGGACGACATTGATGCGGGGGTCCCCACTTCTCGGAAAAGCAATCATCCGGCAGTACCACAGGTTGTCGATAGAATTGCGTTGATCGAAGCGCTCGCTCAGTTGGCTCCGGGCTGCCGCGAGGTATTTGTTCTTTTCGACATAGAGGGTTACAGTCACGTGGAGATTGCGCGGATGCTAGGGTTTACGGTCGGCAATTCTAAGTCGCAGCTCTACAAGGCGAGAATGAAAATTAGGCGATTGCTTAAGTCCGTCAAGTGA
PROTEIN sequence
Length: 205
MMQTASCELPRLQTFFIGVASESPEDSDYALARAAAGGAIAAIGDLYERHNRLVYSLCLRMTRSRPEAEDLTQEVFIHLIRTIGTFRGESQFTSWLYRLTVNRVSMHFRHLSRRKETEVDDIDAGVPTSRKSNHPAVPQVVDRIALIEALAQLAPGCREVFVLFDIEGYSHVEIARMLGFTVGNSKSQLYKARMKIRRLLKSVK*