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H2-18-all-fractions_k255_2081821_5

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: comp(2982..3851)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 260.0
  • Bit_score: 187
  • Evalue 1.20e-44
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 258.0
  • Bit_score: 314
  • Evalue 1.20e-82
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 251.0
  • Bit_score: 173
  • Evalue 6.80e-41

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 870
ATGAACAAACGGAGCGAGTTGAGGGACCGGCGCATCGCCGTGATTTGGCCTTGCTCAACAAGGCGAATCTCACTAAAATCCCCGGTCTTGAGCTCAGCCAGTGCGAACGAAGGAACCGTCAGGCCGGGCGCGTTCGTCACCACGCGCTGGAGCCTGATTGTTTCCGGTGGCGGCTCCAAAAGCAAAGAGCAGGAAACCCGTGCAGCACTCGCCGAGCTTTGCCGCATCTATTGGCGGCCGATTTTTGCTTTTATCTGCCGACGTGGTTATTCGACCCAGGACGCCGAGGACCTCACGCAGGATTTCTTTGTGATGATACTGGAAGGTGATTGGCTTAAGAATGCAGACCCCAGCCGCGGCCGTTTCCGTTCGCTGCTGCTCAAGTCGCTCAAGAACTTTCTCAATGACGCCGCCGACAAAATTCATGCCCGCAAACGCGGAGGGGACGTGAGCTTCATTTCGTGGGACGCCTGGATGTCTGAGGCGCCGTCGGAATTGTCGATGTCAACGCAGACGCTTACTTCCTTGCCCGCGGAGCGACTCTTCGATGTGCGCTGGGCGGCGACGGTAGTGGAACGCGCGCTTCGACGCCTCCGCGAGGAATGCGAACGCAAGGGGCGGCGTCGAGTTTTCGATGTCTTAAGCGCCTACCTCACAGTGGAGCGGGACGATGTCTCGTGCGCGAGTTTGGCCACGAAGTCGGGGGTTCCCCAGGGTACGGTGAAAAAGTTACTTTATCGCATGCGGCAGCGCTACCGCTGGTTGTTGCGCGATGAAGTGGCCCAGACAGTGGAGAATCCTGCTGAGATTGAGGATGAACTCCGCCACCTCTGCGGTGCGCTCGCGGCCAGTTCGGAGCAAGCCAGATAA
PROTEIN sequence
Length: 290
MNKRSELRDRRIAVIWPCSTRRISLKSPVLSSASANEGTVRPGAFVTTRWSLIVSGGGSKSKEQETRAALAELCRIYWRPIFAFICRRGYSTQDAEDLTQDFFVMILEGDWLKNADPSRGRFRSLLLKSLKNFLNDAADKIHARKRGGDVSFISWDAWMSEAPSELSMSTQTLTSLPAERLFDVRWAATVVERALRRLREECERKGRRRVFDVLSAYLTVERDDVSCASLATKSGVPQGTVKKLLYRMRQRYRWLLRDEVAQTVENPAEIEDELRHLCGALAASSEQAR*