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H2-18-all-fractions_k255_3051713_1

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: 1..231

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 67.0
  • Bit_score: 65
  • Evalue 2.60e-08
2'-5' RNA ligase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYS3_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 63.0
  • Bit_score: 62
  • Evalue 1.60e-07
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 67.0
  • Bit_score: 65
  • Evalue 5.30e-09

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Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
CTTGCTGCCGGGCTGGAGCCGGAGCTGCGCCCCTGGCATCCGCACATCACTATTGCGCGCTGCCGCGATGTGGGGCCGCGATCGCTCCGAAATTTCTTAAAGGCGAATGCCAATTTCGATGTAGGAATAATCCGCGTGGAAGCTTTCCATCTTTATTCAAGCAAACTGACTCCCGCCGGTCCAATTCATACGCGCGAGATGAGCGTGCGTTGCCGCGATGAAAAATTGTAG
PROTEIN sequence
Length: 77
LAAGLEPELRPWHPHITIARCRDVGPRSLRNFLKANANFDVGIIRVEAFHLYSSKLTPAGPIHTREMSVRCRDEKL*