ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

H2-18-all-fractions_k255_3413394_3

Organism: H2-18-all-fractions_metab_49

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4
Location: 1486..2817

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 462.0
  • Bit_score: 620
  • Evalue 1.60e-174
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 462.0
  • Bit_score: 620
  • Evalue 1.10e-174
30S ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 448.0
  • Bit_score: 569
  • Evalue 6.60e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1332
ATGATCAGCCTCGGTTGCGCCAAAAATCTTGTCGACGCAGAGATCATGCTGGGAAGCGTTTTGCAACGCGGGATGGAAATCACATCGCGCCCAGAGGACGCCGATGTCCTTGTCGTTAACACCTGCGCGTTCATTGATTCAGCCAAGGAAGAATCAATCGAAGCGATTCTGGAAGCGCATCAGCAACGCGGCTTGAATAGGCGACCGGATCAAAAACTGATTGTGAGCGGTTGCATGTCGCAGCGATTCGCGAAAGAGCTACGCCAGGAAATGCCCGAGGTGGATGCGTTTATCGGGCTCGACGAAGTGAAAGAGTTGGGCGCGGTCGTCGAGCGAGTGCTGGCGAATGGACACGGCGATCTAGCGTTCGCGGATAGCCGCCCGACTTACATTCCCGATTACGACACGCCGCGCTTCAGGCTTACGCCGGCACATTTTGCATACGTAAAAATTGCCGAAGGCTGCAATCACCCATGTAGTTTTTGCGTGATTCCCCAAATGCGCGGCAAACATCGCAGCCGCACTCCGCAATCCGTGGTCGCAGAAATTCACGGGCTGGTCAGCGAAGGCGCGCTCGAAATCAACCTAATCAGCCAGGACACTACGTACTACGGCATGGATTTGTGGCCGATGAAAGCAGGACCGCGCCAGCCGGTCGATTCGACTCACGGGCCGACGCTCGCAGCGCTGCTTCGGGAGATTCAACAAATCGAAGGCGAATTCTGGGTGCGCCTGCTTTACACGCACCCGGCGCATTGGAGCGATGAACTGATTGAGACTATCGCGCAGTGCGACAAGGTCGCGCGCTACATCGATATTCCCCTGCAACATATCGATGATTCAGTGTTGCGACGGATGCGACGAGAAACATCGCGTTCGCACATCGAAAATTTGATTTACAAACTGCGGGCTGGAATTCCCGGCCTTATGTTGCGCACTACTTTCATCGTGGGATTCCCGGGGGAAACGGATGCGGAATTCGCGGAACTTCTCGATTTCATTCGTTGCGCTCGATTCGAACGGCTCGGCATATTCAAGTATTCACACGAAGAAGGCTCGCGCGCGGCGAAAATGCCAGGGCAGATCCCTGCAAAAATTAAGAGCGCACGGTATCGGGCTGCGATGTCGGTTCAGCAGGCGATTGCTCATGAAATTGCGCGGCAGAAAATCGGTACCGAATTGAAATTACTGGTCGATCAGCCCCATGTCGCCCGAAGCGAAGGCGATGCTCCGGACGTCGATGCACACGTTGTCTTATCCAAGGGTGCGCCTGTCGGCGAATTTATTTGGCGCAGGATCACTGGCACGCGCGGCTACGATCTCCTCGCATAG
PROTEIN sequence
Length: 444
MISLGCAKNLVDAEIMLGSVLQRGMEITSRPEDADVLVVNTCAFIDSAKEESIEAILEAHQQRGLNRRPDQKLIVSGCMSQRFAKELRQEMPEVDAFIGLDEVKELGAVVERVLANGHGDLAFADSRPTYIPDYDTPRFRLTPAHFAYVKIAEGCNHPCSFCVIPQMRGKHRSRTPQSVVAEIHGLVSEGALEINLISQDTTYYGMDLWPMKAGPRQPVDSTHGPTLAALLREIQQIEGEFWVRLLYTHPAHWSDELIETIAQCDKVARYIDIPLQHIDDSVLRRMRRETSRSHIENLIYKLRAGIPGLMLRTTFIVGFPGETDAEFAELLDFIRCARFERLGIFKYSHEEGSRAAKMPGQIPAKIKSARYRAAMSVQQAIAHEIARQKIGTELKLLVDQPHVARSEGDAPDVDAHVVLSKGAPVGEFIWRRITGTRGYDLLA*