ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.32 Longest contig: 16.40 Kbp Bin length: 3.23 Mbp GC content: 54.57 %

Contigs count: 992 Features count: 3942 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4

Displaying items 201-250 of 992 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-18-all-fractions_k255_2530959 Species: Pyrinomonas methylaliphatogenes (50%)	2	1838 bp	55.82	0.41	80.30
H2-18-all-fractions_k255_1629400 Species: Pyrinomonas methylaliphatogenes (100%)	2	1694 bp	54.84	0.35	80.40
H2-18-all-fractions_k255_1455252 Species: Candidatus Solibacter usitatus (100%)	2	2059 bp	57.16	0.95	93.39
H2-18-all-fractions_k255_3404610 Species: Chthoniobacter flavus (50%)	2	1881 bp	53.85	0.00	81.34
H2-18-all-fractions_k255_4414713 Species: Pyrinomonas methylaliphatogenes (100%)	2	1609 bp	52.02	0.47	85.02
H2-18-all-fractions_k255_1483471 Species: Candidatus Solibacter usitatus (50%)	2	1949 bp	55.67	0.46	100.05
H2-18-all-fractions_k255_5501160 Species: RHI_Verrucumicrobia_41_10 (50%)	2	2932 bp	53.00	0.10	99.25
H2-18-all-fractions_k255_2599897 Species: uncultured Acidobacteria bacterium (50%)	2	2049 bp	54.32	0.15	91.22
H2-18-all-fractions_k255_3423025 Species: Singulisphaera acidiphila (50%)	2	2187 bp	55.19	0.00	93.42
H2-18-all-fractions_k255_1715455 Species: Terriglobus saanensis (50%)	2	2012 bp	49.55	0.22	75.00
H2-18-all-fractions_k255_3425743 Species: Chthoniobacter flavus (50%)	2	1736 bp	57.26	0.17	98.68
H2-18-all-fractions_k255_338288 Species: GWC2_Rokubacteria_70_16_curated (50%)	2	1813 bp	55.05	0.17	97.63
H2-18-all-fractions_k255_4924830 Species: Candidatus Solibacter usitatus (50%)	2	1644 bp	55.78	0.64	86.68
H2-18-all-fractions_k255_5560687 Species: Streptomyces katrae (50%)	2	1711 bp	48.39	0.26	82.58
H2-18-all-fractions_k255_1540111 Species: Methylacidiphilum fumariolicum (50%)	2	2706 bp	54.43	0.22	94.57
H2-18-all-fractions_k255_3500237 Species: Candidatus Contendobacter odensis (50%)	2	1637 bp	55.35	0.46	83.38
H2-18-all-fractions_k255_5566548 Species: Blastopirellula marina (50%)	2	1950 bp	57.33	0.46	90.31
H2-18-all-fractions_k255_1552606 Species: R_Acidobacteria_61_28 (50%)	2	1604 bp	53.37	1.50	81.55
H2-18-all-fractions_k255_5574152 Species: Chthoniobacter flavus (100%)	2	1691 bp	53.46	0.89	98.29
H2-18-all-fractions_k255_2012438 Species: Candidatus Koribacter versatilis (100%)	2	1575 bp	49.71	0.76	100.19
H2-18-all-fractions_k255_5597338 Species: Acidobacterium capsulatum (50%)	2	1527 bp	56.45	0.20	90.57
H2-18-all-fractions_k255_1652095 Species: Chthoniobacter flavus (50%)	2	1952 bp	57.48	0.00	89.29
H2-18-all-fractions_k255_5605579 Species: Candidatus Koribacter versatilis (50%)	2	1522 bp	52.04	0.89	65.64
H2-18-all-fractions_k255_2122566 Species: Ktedonobacter racemifer (50%)	2	1612 bp	46.96	0.19	63.46
H2-18-all-fractions_k255_2125268 Species: Anaeromyxobacter sp. Fw109-5 (50%)	2	1725 bp	55.48	0.52	88.00
H2-18-all-fractions_k255_1627400 Species: Pedosphaera parvula (50%)	2	1632 bp	55.02	0.00	100.37
H2-18-all-fractions_k255_5666708 Species: RLO_Rokubacteria_71_22 (50%)	2	1960 bp	56.94	0.15	96.89
H2-18-all-fractions_k255_5265184 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (50%)	2	1524 bp	55.18	0.89	99.02
H2-18-all-fractions_k255_1700540 Species: Pedosphaera parvula (100%)	2	2056 bp	58.75	0.00	96.45
H2-18-all-fractions_k255_5670547 Species: Chthoniobacter flavus (100%)	2	3846 bp	54.81	0.27	96.65
H2-18-all-fractions_k255_5110517 Species: marine sediment metagenome (50%)	2	1534 bp	55.93	0.00	86.64
H2-18-all-fractions_k255_1708132 Species: RBG_16_Chloroflexi_57_11_curated (50%)	2	2302 bp	58.21	0.26	98.78
H2-18-all-fractions_k255_4741646 Species: Pyrinomonas methylaliphatogenes (50%)	2	1683 bp	52.47	0.53	72.19
H2-18-all-fractions_k255_2877311 Species: Candidatus Entotheonella sp. TSY2 (50%)	2	1735 bp	51.30	1.30	78.33
H2-18-all-fractions_k255_5710731 Species: Rhodopirellula maiorica (50%)	2	1554 bp	57.66	0.29	96.72
H2-18-all-fractions_k255_2991946 Species: Gloeobacter violaceus (50%)	2	1810 bp	54.86	0.33	79.39
H2-18-all-fractions_k255_1749409 Species: R_Deltaproteobacteria_50_16 (50%)	2	1821 bp	57.33	0.33	90.28
H2-18-all-fractions_k255_3170063 Species: Coleofasciculus chthonoplastes (50%)	2	2162 bp	60.22	0.97	97.69
H2-18-all-fractions_k255_3623754 Species: Pedosphaera parvula (50%)	2	2703 bp	54.57	0.06	89.57
H2-18-all-fractions_k255_5757074 Species: Pedosphaera parvula (50%)	2	5352 bp	55.96	0.11	97.20
H2-18-all-fractions_k255_2620478 Species: Ktedonobacter racemifer (50%)	2	1710 bp	52.75	0.18	65.44
H2-18-all-fractions_k255_5776802	2	1979 bp	52.65	0.91	99.75
H2-18-all-fractions_k255_3046523 Species: RBG_16_Acidobacteria_70_10_curated (50%)	2	2285 bp	54.18	0.26	97.29
H2-18-all-fractions_k255_3672222 Species: Akkermansia sp. CAG:344 (50%)	2	1518 bp	53.95	0.59	100.79
H2-18-all-fractions_k255_1804073 Species: Chthoniobacter flavus (50%)	2	2599 bp	53.52	0.12	96.61
H2-18-all-fractions_k255_1815783 Species: Methylacidiphilum infernorum (50%)	2	1651 bp	52.82	0.91	99.94
H2-18-all-fractions_k255_3694426 Species: RBG_16_Chloroflexi_54_18_curated (50%)	2	1913 bp	53.53	0.00	85.94
H2-18-all-fractions_k255_1822127 Species: Prochlorococcus marinus (50%)	2	1687 bp	54.18	0.18	91.58
H2-18-all-fractions_k255_5849591 Species: Calothrix parietina (50%)	2	1554 bp	54.05	1.64	100.19
H2-18-all-fractions_k255_1568748 Species: RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated (50%)	2	1597 bp	49.41	0.38	99.56

Displaying items 201-250 of 992 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-18-all-fractions_metab_49) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-18-all-fractions_metab_49

wsip-metawrap-drep-bins_Bacteria_55_0

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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